Achromobacter xylosoxidans NH44784-1996: NH44784_037151
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Entry
NH44784_037151 CDS
T02785
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Pathway
axo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NH44784_037151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axo03021
]
NH44784_037151
03019 Messenger RNA biogenesis [BR:
axo03019
]
NH44784_037151
Transcription machinery [BR:
axo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NH44784_037151
Messenger RNA biogenesis [BR:
axo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NH44784_037151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCH07662
LinkDB
All DBs
Position
complement(3966742..3968001)
Genome browser
AA seq
419 aa
AA seq
DB search
MHLNELKALHVSQLLEMAAGLEIENANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GVAPEAIKHRIMFENLTPLHPNQPLRLERDIKSEENLTGRILDVFAPIGKGQRGLIVASP
KSGKTVMMQHIAHAITTNYPDAVMIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPSINL
NKSGTRREELLIAPDLLQKVWVLRKFIHDMDEVQSMEFILDKMRATKTNAEFFDMMKKK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaacgaactgaaggcgctgcatgtctcgcagctgctggaaatggccgctggc
ctggaaatcgagaacgccaaccgcctgcgcaagcaggagctgatgttcgccatcatgaaa
cggcgcgccaagcagggcgagcagatctttggcgacggcgtgctggaagtcctgcccgat
ggctttggtttcctgcgctcgcccgagacctcgtatctggccagcacggacgatatctac
atctcgccgtcccagatccgccgcttcaacctgcacaccggcgactcgatcgaaggcgag
gtgcgcacgcccaaggatggcgaacgctacttcgcgctggtcaaggtggacaaggtcaac
ggcgtggcgcccgaggcgatcaagcatcgcatcatgttcgagaacctgacgccgctgcat
ccgaaccagccgctgcgcctggaacgcgacatcaagagcgaggaaaacctcaccggccgt
atcctcgacgtcttcgcccccatcggcaagggccagcgcggcctgatcgtcgccagcccc
aagtccggcaagacggtgatgatgcagcacatcgcgcacgccatcaccaccaactacccc
gacgcggtcatgatcgtcctgctggtggacgagcgccccgaggaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctcgaccttcgatgagcccgccacccgccacgtg
caggtcgccgaaatggtcatcgaaaaggccaagcgcctggtcgaaatgaagaaggacgtg
gtgatcctgctggactcgatcacccgcctggcgcgcgcctacaacaccgtggtgccggct
tccggcaaggtgctgaccggtggtgtcgacgccaacgccctgcaacgtcccaagcgcttc
ttcggcgccgcgcgcaacctcgaggaaggcggctcgctgaccatcctgggcaccgcgctg
atcgagaccggcagccgcatggacgaagtcatctacgaagaattcaagggcaccggcaac
tccgaagtgcacctggagcgtcgcctggcggaaaagcgcgtctacccgtccatcaacctg
aacaagtcgggcacccgccgcgaagaactgctgatcgcgccggacctgctgcagaaggtc
tgggtgctgcgcaagttcatccacgacatggacgaagtccagtccatggaattcatcctg
gacaagatgcgcgccaccaagaccaacgccgaattcttcgacatgatgaagaagaagtaa
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