Achromobacter xylosoxidans NCTC10807: ERS451415_00629
Help
Entry
ERS451415_00629 CDS
T04522
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
axx03016
]
ERS451415_00629 (rnb)
Enzymes [BR:
axx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ERS451415_00629 (rnb)
Transfer RNA biogenesis [BR:
axx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ERS451415_00629 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
DUF7691
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
CKG82800
LinkDB
All DBs
Position
1:complement(674564..676471)
Genome browser
AA seq
635 aa
AA seq
DB search
MYVFYEDDGSFKAGHILSETDASLQVESESGKRSKIKRANTLFNFAAPEPAALMAQAAAL
AETLDLQFLWECAPQEEFESPALAADYFGHAPTPVEQAALLMRLHGAPAYFHRRGKGSYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQVAESLLIRPDKNSQQWKA
LDAACARLGKSPDRLLLELGAWPHALALHKRRFLAVNFPRGLAFPELELPPIDRELPLSD
AEIYSVDDVTTTEIDDALSVSTLPDGNLRVGIHVAAPGLTVTRDSEFDKLARARLSTVYM
PGDKIPMQPDNVIKAFSLDAGREVPVLSLYVVANPETGEVIESDTRLERVVVRENLRHNM
LDAQVTEDSLNDTSTDLPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGDP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLNQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQHNITRTVAHVLREDLVRFANCPLVTRIGGMPELER
GTAVEVEILGMDELSLELDCRYVGQVGPAAEEAAA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggccatatcctgtccgaaacc
gacgccagcctccaggtggagtcggagtcgggcaagcgcagcaagatcaagcgcgccaat
acgctgttcaatttcgccgcgcccgaacccgccgcgctgatggcccaggcggccgcgctg
gccgaaaccctggacctgcaattcctgtgggaatgcgcgccccaggaggaattcgagtcc
ccggccctggcggccgactatttcggccacgcccccaccccggtcgagcaggccgccctg
ttgatgcgcctgcatggcgcgcccgcctatttccaccgccgcggcaagggcagttaccgc
cctgccccgcccgacatcctggccgccgccctggccgcgctggaaaagaaacagcgccag
gccgagcagcagcaggaatgggtggacgagatggccgccggccgcctgcccgagcccatc
gcccaggtcgccgaatcgctgttgatccggcccgacaagaattcgcagcaatggaaggcg
ctggacgccgcctgcgccaggctcggcaagagccccgaccgcctgttgctggaactgggc
gcctggccgcacgccctggcgctgcacaagcgccgcttcctggcggtgaactttccccgg
ggcctggcctttcccgagctggaactgccgccgatcgaccgcgaactgccgctgtcggac
gccgagatctattcggtcgacgacgtcaccaccaccgagatcgacgacgccctgtcggtt
tccaccctgcccgacggcaacctgcgcgtcggcatccacgtggccgcgcccggcctgacg
gtgacgcgcgacagcgaattcgacaagctggcgcgcgcgcgtctgtccacggtctacatg
ccgggcgacaagatcccgatgcagcccgacaacgtcatcaaggccttctcgctggacgcg
ggccgcgaggtgccggtgctgtcgctgtacgtggtggccaacccggagaccggcgaggtc
atcgaatccgacacgcgcctggagcgcgtggtggtgcgcgaaaacctgcgccacaacatg
ctggacgcccaggtcaccgaagacagcctgaacgacacttccactgacctgccctacggc
cactggctgcgcccgctgtggaagctggcgcaggccttgtcggcgcagcgcgagaacgtg
cgcggcaagcccgagaacaattcgcgggtggagtacagcttctacctggacggcgacccc
gacgatcccgacaccccggtgcgcctggtgccgcgccagcgcaacgcgccgctggaccgg
atggtggccgagtacatgatcctggccaataacctgtggggcggcctgctgaaccagcac
ggcgtgccgggcatctaccgctcgcaacaggccggccgtgtgcgcatgagcacccaggcg
ctgccgcacgaggccatcggcgtgccgcagtacgcctggagcacgtcgccgctgcgccgc
tacgtcgacctggtgaaccagtggcagctgatcgccgccgtcgagcacggcgtctcggcg
cgcctggtggctcccttcaaaccgcgcgacgcggatctgttcgcgatcatcggcgcgttc
gacgcgcagtacgcggcctgggccgagttccagagcgcgatggagcgctactggtgcctg
cgctggctcaagcagcacaacatcacccgcaccgtggcgcacgtgctgcgcgaagacctg
gtgcgcttcgccaactgcccgctcgtcacccggatcggggggatgcccgagctggagcgc
gggacggcggtggaggtggagattctggggatggatgagttgtcgctggagctggattgc
cggtatgtggggcaggtggggccggcggctgaagaggctgctgcttag
DBGET
integrated database retrieval system
