Achromobacter xylosoxidans NCTC10807: ERS451415_00907
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Entry
ERS451415_00907 CDS
T04522
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase precursor
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Pathway
axx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ERS451415_00907 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axx03019
]
ERS451415_00907 (pcnB)
Enzymes [BR:
axx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ERS451415_00907 (pcnB)
Messenger RNA biogenesis [BR:
axx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ERS451415_00907 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
CKG90250
LinkDB
All DBs
Position
1:complement(973762..975147)
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AA seq
461 aa
AA seq
DB search
MITETIKKFVGRLFAPAARGPLRIGRDKHGIDRRNVSRHAIKVCEVLRQHGYEAYIVGGA
VRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPAS
EDQETDAHGRILRDNVFGTHEEDAARRDFTMNALYYDPHNEEVIDFHNGVADLKKRQIRM
IGDPAKRYREDPVRMLRAVRFAAKLNGTIDPATRQPIRTMADLIENVPASRLFDEMLKLL
TCGHAMDCLRQLRADGLHNGLLPLLDVVLEQPGGEHFVELALERTDARVRAGKTISPSFL
FAALLWQQVEVRWKQLRAQGEHTIPALSQAADSVLDEQTEKLAIQRRFSSDMREIWFMQP
RFERRMGKTIFRMIEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANADDATRADMIEE
VSRLPRDASDGPAPSARKRRPRRRSSSRGAGSAAGSAGGAE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgaaaccataaaaaaattcgtcggccgactgttcgcgccggcagcccggggg
cctttgcgcatcggacgcgacaagcacggcatcgaccgccgcaacgtctcgcgccacgcc
atcaaggtatgcgaggtgctgcgccagcacggctatgaagcctatatcgtcggcggcgcg
gtacgcgacctgatcgtcggcctggaacccaaggacttcgacgtcgccaccaacgccacg
cccgagcagatccgcccgctgttccgccgcgcccgcatcatcggccgccgcttccagctg
gtgcacgtggtgttcggccaggaaatcatcgagacctccaccttccgcgcgcccgcctcg
gaagaccaggaaaccgacgcgcacggccgcatcctgcgcgacaacgtgttcggcacgcac
gaggaagacgcggcgcgccgcgacttcaccatgaacgcgctgtactacgacccgcacaac
gaggaagtcatcgacttccacaacggcgtggccgacctgaaaaagcgccagatccgcatg
atcggcgacccggccaagcgctaccgcgaagatccggtgcgcatgctgcgcgcggtgcgt
ttcgccgccaagctgaacggcacgatcgacccggccacgcgccagccgatccgcaccatg
gccgacctgatcgagaacgtgccggcttcgcgcctgttcgacgagatgctcaagctgctg
acctgcggccacgccatggactgcctgcgccagctgcgcgccgacggcctgcacaacggc
ctgctgccgctgctggacgtggtgctggaacagccgggcggcgagcacttcgtggaactg
gcgctggaacgcaccgacgcccgcgtgcgcgccggcaagaccatcagccccagcttcctg
ttcgccgcgctgctgtggcaacaggtggaggtgcgctggaagcagctgcgcgcccagggc
gaacacaccatcccggcgctgtcgcaggccgccgactcggtgctcgacgagcagaccgag
aagctcgcgatccagcgccgcttctcgtcggacatgcgcgagatctggttcatgcagccg
cgcttcgagcgccgcatgggcaagaccatcttccgcatgatcgagcagccgcgcttccga
gccgcctgcgacttcctgcaactgcgggccgccgccggcgagttcgacagcgtgctggcg
cagtggtggatggacctggccaacgccgacgacgccacccgcgccgacatgatcgaggaa
gtctcgcgcctgccgcgcgacgccagcgacggcccggcgccatcggcgcgcaagcgccgg
ccgcgccgccgctcgtcctcgcgtggcgcgggcagcgccgcgggcagtgccggcggcgcc
gaataa
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