Achromobacter xylosoxidans NCTC10807: ERS451415_01895
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Entry
ERS451415_01895 CDS
T04522
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Pathway
axx03030
DNA replication
axx03430
Mismatch repair
axx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ERS451415_01895 (dnaE_1)
03430 Mismatch repair
ERS451415_01895 (dnaE_1)
03440 Homologous recombination
ERS451415_01895 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
axx03032
]
ERS451415_01895 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
axx03400
]
ERS451415_01895 (dnaE_1)
Enzymes [BR:
axx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ERS451415_01895 (dnaE_1)
DNA replication proteins [BR:
axx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ERS451415_01895 (dnaE_1)
DNA repair and recombination proteins [BR:
axx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ERS451415_01895 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
CKH15091
LinkDB
All DBs
Position
1:2072680..2076108
Genome browser
AA seq
1142 aa
AA seq
DB search
MVDGIVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFYKGARGAGIKPIAGCDVWLSNDD
DPAKPFRVLLLVRNHQGYLNLCELLSRAFLTNQGKGRAEIRREWLQGQDGLIVLSGGRGG
DVGQALDAGNAVSALALARQWAHMFPGSYYIELQRAGMDGDEAYTQAAMRLAAEAGLPVV
ATHPVQFLDEYEFQAHEARVCIAEGEILANPRRVRRFSKEQYLLSSEEMARRFADVPSAL
ANTVEIAKRCNLSLVLGKPRLPNFPTPDGVSLDDYLVQLSEEGLEKRMAFLFPDEAERAS
KREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNGVPVGPGRGSGAGSLVAYALGI
TDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVIDYVKEKYGRAAVSQIATFGTL
GAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWTLERTLKDEPAFKDRYEQEEEVRAL
VDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPGQENSAVSQFDKDDVEAAGLVK
FDFLGLRNLTILDWAVRYVRQFNEDKRDFDVMALSLDDPAAYKILCDANTTAVFQLESRG
MKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNRKHGRAAVDYFHNDLESTLKST
YGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEEMAKHRELFEKGAKEKGHDPDL
AVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYHPTEFLAATMSSDMDDTDKVQIF
CRDAQDNGVEVLPPDVNFSGYRFEPVADKHTEKGKPPRTMRYGLGAVKGTGQGAVEDILR
ARKEGGPFQNLFDFCRRVSKHAVNRRTIEALIKAGAFDTIEPNRAAMLASVPTAMEAAEQ
AARSANQSSLFGDDSSDVVAGELAKVAPWDLHKKLTEEKSALGYYYSGHLFDAWRDEVRQ
IVPMQLARVEPQRDLQWMCGVLASVRVMMTRRGKMVFAVLDDGTAQVEISVFNELYEKHR
NRLREDQLVIVQGKVSNDDYSGGMRIVAEQLYDLQLAREARAKSLRVKLNGGADAARLRQ
MLNPFRAEPENGIPGVPVDIVYTKNNFLCTVRLGEEWRVRMADTLLENLNAWTKPNGVEV
TY
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
gtggtggatggcatcgtgcgcattcccgacctcatcaagcgtgtcgccaagctgggccag
ccggcagtcgcgctgaccgatctgtcgaacctgttcggcctgatcaagttctacaagggc
gcgcgcggcgcgggcatcaagcccatcgccggctgtgacgtctggctgagcaacgacgac
gatcccgccaagccgttccgcgtgttgctgctggtgcgcaaccaccagggctacctgaac
ctgtgcgaactgctgtcgcgcgcgttcctgaccaaccagggcaagggccgggccgagatc
cgccgtgaatggctgcagggccaggacggcctgatcgtgctgtcgggtggccgcggcggc
gacgtcggccaggcgctggacgccggcaacgcggtgtcggcgctggccttggcgcgccag
tgggcgcatatgttcccgggcagctactacatcgagctgcaacgtgccggcatggacggc
gacgaggcctacacccaggccgccatgcgcctggcggccgaggccggcctgccggtggtg
gccacgcacccggtgcagttcctggacgaatacgaattccaggcgcacgaggcgcgcgtc
tgcatcgccgaaggcgagatcctggccaacccgcgccgcgtgcgccgcttcagcaaggaa
cagtacctgctcagttccgaggaaatggcgcgtcgctttgccgacgtgccctcggcgctg
gccaatacggtcgagatcgccaagcgctgcaacctcagcctggtgctgggcaagccgcgc
ctgcccaacttccccacgcccgacggtgtgtcgctggacgactacctggtgcagctgtcc
gaagagggcctggaaaagcgcatggccttcctgttcccggatgaagccgagcgcgcgtcc
aagcgcgagcagtactacgaacgcctgcgctgggaatgcaagaccatcatccagatgggc
ttcccgggctacttcctgatcgtgcaggacttcatcaactggggcaagaacaacggcgtg
ccggtcggcccgggccggggttcgggcgccggttcgctggtggcgtacgcgctcggcatc
accgacctggatccgatccgctacgacttgctgttcgagcgcttcctgaatcccgagcgg
gtctcgatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgcgtcatcgac
tacgtcaaggaaaaatacggtcgcgccgccgtgagccagatcgccaccttcggcacgctg
ggcgccaaggccgtggtgcgcgacgccggccgggtgctggacatgccctacatgttctgc
gacggcctgtccaagctgatcccgttcaacccgatggacccctggacgctcgagcgcacc
ctgaaggacgaaccggccttcaaggaccgctacgagcaggaagaggaagtgcgcgcgctg
gtcgacctggccaagccgctcgaaggcctgacgcgcaacatcggcatgcacgccggcggc
gtgctgatcgcgcccggcaagctcaccgacttctgcccgctgtattgccagccggggcag
gagaacagcgcggtgtcgcagttcgacaaggacgacgtcgaagccgccggcctggtcaag
ttcgacttcctgggcctgcgcaacctgaccatcctggactgggccgtgcgctacgtgcgc
cagttcaacgaggacaagcgcgacttcgacgtcatggcgctcagcctcgacgatccggcc
gcctacaagatcctgtgcgacgccaacaccaccgcggtgttccagctggaatcgcgcggc
atgaaggagctgctcaagaagctgcggcccaacaccttcgaagacatcatcgccatgctg
gccctgtaccgtccggggccgctggaatcgggcatggtggacgacttcgtcaaccgcaag
cacggccgcgccgcggtggactacttccacaacgatctggagagcacgctcaagagcacc
tacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcggcggctac
tcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaaaaagcccgaggaaatg
gccaagcaccgcgagctgttcgagaagggcgccaaggaaaagggccacgaccccgacctc
gcggtcaagctgttcgacctgatggagaagttcgcgggctacggcttcaacaagtcgcac
tcggccgcgtacgcgctgatctcctaccagaccgcctggctcaaggcctaccacccgacc
gagttcctggccgccaccatgtcctccgacatggacgacaccgacaaggtccagatcttc
tgccgcgacgcccaggacaacggcgtcgaggtgctgccgcccgacgtcaatttctcgggc
taccgcttcgaacccgtggctgacaagcacaccgaaaagggcaagccgccgcgcaccatg
cgctacggcctgggggcggtcaagggcacggggcagggcgcggtcgaggacatcctgcgc
gcccgcaaggaaggcggcccgttccagaacctgttcgacttctgtcgccgcgtcagcaag
cacgcggtcaaccgccgcaccatcgaggccctgatcaaggccggcgccttcgacaccatc
gaacccaatcgcgccgccatgctggcctcggtgcccaccgccatggaagcggccgagcag
gccgcgcgcagcgccaaccagtcctcgctgttcggcgacgacagcagcgacgtggtggcc
ggcgaactggccaaggtcgcgccgtgggacctgcacaagaagctgaccgaggaaaaatcg
gcgctgggctactactacagcggccacctgttcgacgcctggcgcgacgaagtgcgccag
atcgtgccgatgcagctggcgcgggtcgagccgcagcgcgacctgcaatggatgtgcggg
gtgctggccagcgtgcgcgtcatgatgacccgtcgcggcaagatggtgttcgcggtgctg
gacgacggcaccgcgcaggtcgagatctcggtgttcaacgagctctacgaaaagcaccgc
aaccgcctgcgcgaagaccaactggtcattgtccagggcaaggtcagcaacgacgactac
tcgggcggcatgcgcatcgtcgccgagcagctctacgacctgcaactggcgcgcgaggcg
cgcgccaagtcgctgcgcgtcaagctcaacggcggcgcggacgccgcgcgcctgcgccag
atgctcaacccgttccgcgccgagcccgagaacggcatccccggcgtgccggtggacatc
gtctacaccaagaacaatttcctgtgcacggtgcggctgggcgaggaatggcgggtccgc
atggccgataccctgctcgaaaacctgaatgcctggaccaagcccaacggcgtggaggtc
acctactga
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integrated database retrieval system
