Achromobacter xylosoxidans NCTC10807: ERS451415_01944
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Entry
ERS451415_01944 CDS
T04522
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
axx
Achromobacter xylosoxidans NCTC10807
Pathway
axx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ERS451415_01944 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axx03021
]
ERS451415_01944 (rho)
03019 Messenger RNA biogenesis [BR:
axx03019
]
ERS451415_01944 (rho)
Transcription machinery [BR:
axx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ERS451415_01944 (rho)
Messenger RNA biogenesis [BR:
axx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ERS451415_01944 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
ResIII
Motif
Other DBs
NCBI-ProteinID:
CKH16474
UniProt:
A0A0D6H124
LinkDB
All DBs
Position
1:complement(2136085..2137344)
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AA seq
419 aa
AA seq
DB search
MHLNELKALHVSQLLEMAAGLEIENANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GVAPEAIKHRIMFENLTPLHPNQPLRLERDIKSEENLTGRILDVFAPIGKGQRGLIVASP
KSGKTVMMQHIAHAITTNYPDAVMIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPSINL
NKSGTRREELLIAPDLLQKVWVLRKFIHDMDEVQSMEFILDKMRATKTNAEFFDMMKKK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaacgaactgaaggcgctgcatgtctcgcagctgctggaaatggccgctggc
ctggaaatcgagaacgccaaccgcctgcgcaagcaggagctgatgttcgccatcatgaaa
cggcgcgccaagcagggcgagcagatctttggcgacggcgtgctggaagtcctgcccgat
ggctttggtttcctgcgctcgcccgagacctcgtatctggccagcacggacgatatctac
atctcgccgtcccagatccgccgcttcaacctgcacaccggcgactcgatcgaaggcgaa
gtgcgcacgcccaaggatggcgaacgctacttcgcgctggtcaaggtggacaaggtcaac
ggcgtggcgcccgaggcgatcaagcatcgcatcatgttcgagaacctgacgccgctgcat
ccgaaccagccgctgcgcttggaacgcgacatcaagagcgaggaaaacctcaccggccgc
atcctcgacgtcttcgcccccatcggcaagggccagcgcggcctgatcgtcgccagcccc
aagtccggcaagacggtgatgatgcagcacatcgcgcacgccatcaccaccaactacccc
gacgcggtcatgatcgtcctgctggtggacgagcgccccgaggaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctcgaccttcgatgagcccgccacccgccacgtg
caggtcgccgaaatggtcatcgaaaaggccaagcgcctggtcgaaatgaagaaggacgtg
gtgatcctgctggactcgatcacccgcctggcccgcgcctacaacaccgtggtgccggct
tccggcaaggtgctgaccggcggtgtcgacgccaacgccctgcaacgtcccaagcgcttc
ttcggcgccgcgcgcaacctcgaggaaggcggctcgctgaccatcctgggcaccgcgctg
atcgagaccggcagccgcatggacgaagtcatctacgaagaattcaagggcaccggcaac
tccgaagtgcacctggagcgtcgcctggcggaaaagcgcgtctacccgtccatcaacctg
aacaagtcgggcacccgccgcgaagaactgctgatcgcgccggacctgctgcagaaggtc
tgggtgctgcgcaagttcatccacgacatggacgaagtccagtccatggaattcatcctg
gacaagatgcgcgccaccaagaccaacgccgaattcttcgacatgatgaagaagaaataa
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