Achromobacter xylosoxidans NCTC10807: ERS451415_02793
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Entry
ERS451415_02793 CDS
T04522
Name
(GenBank) Eukaryotic DNA topoisomerase I%2C catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
axx03032
]
ERS451415_02793
03400 DNA repair and recombination proteins [BR:
axx03400
]
ERS451415_02793
Enzymes [BR:
axx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ERS451415_02793
DNA replication proteins [BR:
axx03032
]
Prokaryotic type
DNA Topoisomerases
ERS451415_02793
DNA repair and recombination proteins [BR:
axx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ERS451415_02793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF6933
Motif
Other DBs
NCBI-ProteinID:
CKH42206
LinkDB
All DBs
Position
1:complement(3068616..3069647)
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AA seq
343 aa
AA seq
DB search
MANRSPAPPERGADDALVYMDDTGPGYSRVRVNGATFHYLDTHGRRITRAAELARIRALA
IPPAYEDVWICPLPHGHLQATGRDARGRKQYRYHPAWARLRDADKYQSLGAFGLQLPRIR
RRVQHDLLMPGLPRAKVIAAVVRLLDDTLIRIGTREYARANRSYGLTTLTRRHASVSGDR
LRFRFRGKSGVAHDVTVRDRRIARVAKRCLEIPGQQLFQYLDETGEAHGIDSEAVNAYLR
EAGAADFSAKHYRTWAGSVLAFAALQACPWVDERQARQAVVDVIKQVSRRLANTPAVCRA
CYVHPSIIEEYLAGRLPPRAAAPARPRGLNADERRLLAFLRDA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccgcagccccgcgccgcccgagcgcggcgccgatgacgcgctggtctatatg
gacgacaccgggcccggctattcccgggtgcgggtcaacggcgcgaccttccattacctg
gatacgcatggcaggcgcatcacccgcgcggccgaattggcgcgcatccgcgccctggcg
atcccgccggcgtacgaagatgtctggatctgcccattgccgcatggccatctgcaggcg
accggacgcgatgcgcgtggccgcaagcaatatcgctaccaccccgcctgggcacggttg
cgcgacgccgacaaataccagagcctgggcgcgttcggcctgcagctgccccgcatccgg
cgccgggtgcagcacgacttgctgatgccgggcctgcctcgggccaaagtgatcgccgcg
gtggtgcgcctgctggacgacaccctgatccgcatcggcacgcgtgaatatgcgcgcgcc
aatcgctcctacggcctgaccaccctgacgcgacgccacgccagcgtcagtggcgaccgc
ctgcgcttccgattccgcggcaagagcggcgtggcgcatgacgtgacggtaagagaccgg
cgcatcgcccgggtggccaagcgctgcctggagatccccggccagcaattgttccagtac
ctggacgaaaccggcgaggcccatggcatcgattcggaggcggtcaatgcctatctgagg
gaagccggcgccgccgatttcagcgccaagcactaccggacctgggcgggttccgtgctg
gccttcgcggcgctgcaggcctgcccctgggtcgatgaacggcaggcgcggcaggcagtg
gtggacgtcatcaagcaggtatcgcgacggctggccaatacgccggcggtctgtcgcgcc
tgctacgtgcatccatcgatcatcgaggaatacctggcggggcgactgccgccgcgcgcc
gccgcgcccgcgcggccgcgcggcctgaatgccgacgagcggcggctgctggccttcctg
cgggacgcctga
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