Achromobacter xylosoxidans NCTC10807: ERS451415_03874
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Entry
ERS451415_03874 CDS
T04522
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Pathway
axx03420
Nucleotide excision repair
axx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERS451415_03874 (uvrD)
03430 Mismatch repair
ERS451415_03874 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
axx03400
]
ERS451415_03874 (uvrD)
Enzymes [BR:
axx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERS451415_03874 (uvrD)
DNA repair and recombination proteins [BR:
axx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERS451415_03874 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ERS451415_03874 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
T7SS_EccA1_N
Motif
Other DBs
NCBI-ProteinID:
CKH76850
LinkDB
All DBs
Position
1:complement(4244144..4246435)
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AA seq
763 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTN
KAAREMLARMSAILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQTFQILDVTDQLAAIK
RLMKANGVDDEKYPPRDVQRFINGAKEEGLRPADVEAYDAHRRRLIEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNASVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMSDFERDYAHGTVIRLEQNYRSYGHILDSANALIGHNSGRLG
KNLWTDQGEGEPVRVIEQPSDGMEAQWIVDEIRSLIHEGSLRREIAVLYRSNAQSRVIEH
AIFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPHDDTSWMRVVNFPTRGIGARTLEQ
LADAARAHDSSLYAAVALVAGKGGSNLAQFAQLIHRMTEETRDLPLPEMVEHMLEASGLN
AHYKAEREGAERLENLNELITAAAVFASEENYDGMPAGVVPEQATSSTLMPGVVDAAPVA
SDGLTPLAAFLSHAALEAGDNQAQQGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SILEQSGLEEERRLMYVAITRARQRLYISLAQSRMLHGQTRYAMRSRFLDEIPEQHLKWL
SPKAGLAPALSAGGGWNGNRGDAFGRKPTNTIAPRQPRGTASGVTVGDKQYRVGQGVHHA
RFGDGTIVSLSGAGQDAQAEIHFRDVGSKTLALGIAKLDIVQG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagagaaactcaatcctgaacaacgcgccgcagtaacgttagaaccgcagcac
gccctggtcctggccggggcgggcagcggcaagacccgggtgctcaccacccgcatggcc
tggctgattcaaaccggccaggcctcgccttttgggctgctggcggtcacgttcaccaac
aaggccgcccgcgaaatgctggcgcgcatgtcggccatcctgccgatcgatacgcgcggc
ctctggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatcatcgcgac
gccggcctgccgcagaccttccagatcctcgacgtcaccgaccagctcgccgccatcaag
cggctgatgaaggccaacggcgtcgacgacgaaaaatacccgccgcgcgacgtgcagcgc
ttcatcaacggcgccaaggaagagggcctgcgccccgccgacgtcgaagcctatgacgcg
catcgccgccgcctgatcgagatctaccagctctacgaagcccagtgccagcgcgaaggc
gtggtcgacttcgccgagctgctgctgcgcgcctacgaactgctgtcgcgcaacgcgtcg
gtgcgcgagcactaccaacgccgtttccgccacatcctggtcgacgagttccaggacacc
aacacgctgcagtacaagtggctgcggctgctggccggcggcggcgcggcgatcttcgcc
gtgggcgacgacgaccagtcgatctacgcgttccgcggcgccaacgtcggcaacatgtcc
gacttcgagcgcgactacgcgcacggcaccgtcatccgcctggagcagaactaccgctcg
tacggccacatcctggattcggccaacgcgctcatcggccacaacagcggccgcctgggc
aagaacctctggaccgaccagggcgaaggcgaaccggtgcgcgtcatcgagcagccctcg
gacggcatggaagcgcaatggatcgtcgacgagatccgctcgctgatccacgaaggcagc
ctgcggcgcgagatcgccgtgctctaccgcagcaacgcgcagtcgcgcgtgatcgaacac
gccatcttctcggccggcataccctacaaggtgtatggcggcctgcgcttcttcgagcgc
caggaaatcaagcacgccctggcctacctgcgcctgatggccaatccgcacgacgacacc
tcgtggatgcgggtagtgaatttccccacgcgcggcatcggcgcgcgcacgctggaacag
ctggccgacgcggcccgcgcgcacgattccagcctgtacgcggccgtggcgctggtggcc
ggcaagggcggctccaacctggcccagttcgcccagctgatccatcgcatgaccgaggaa
acgcgcgacctgccgctgcccgaaatggtcgagcacatgctcgaggccagcggcctgaac
gcgcactacaaggccgagcgcgaaggcgccgagcgcctcgaaaacctgaacgaactgatc
accgccgcggcggtgtttgcgtccgaggaaaactacgacggcatgcccgccggcgtggtg
cccgagcaggccacctccagcacgctgatgcccggggtggtcgatgcggcgccggtggcg
tccgacggcctgacgccgctggcggctttcctgtcgcacgccgcgctcgaggccggcgac
aatcaggcccagcagggccaggacgccgtgcagctcatgaccgtgcacgcggccaagggc
ctggagttcgacgctgtctttatcaccggcctcgaggaaggcctgttcccgcacgagaac
agcatcctggagcaatccggcctggaagaagaacgccgcctcatgtacgtggcgatcacc
cgcgcgcgccagcgcctgtacatcagcctggcgcaaagccgcatgctgcatggccagacg
cgctacgccatgcgttcgcgctttctcgacgaaattcccgagcagcatctcaagtggctg
tcgcccaaggccggcctggcgccggcgctcagcgccggtggcggctggaacggcaaccgc
ggcgacgccttcggccgcaagcccaccaacaccattgcgccgcgtcaaccgcgcggcacg
gcctccggcgtcaccgtcggcgacaagcagtatcgtgtagggcagggcgtgcaccacgcc
cgtttcggtgacggcaccatcgtcagcctgagcggcgcggggcaggacgcccaggcggag
atccatttccgcgatgtcgggtccaagacgctggcgctgggcatcgccaagctggatatc
gttcaaggttga
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integrated database retrieval system
