Achromobacter xylosoxidans NCTC10807: ERS451415_05073
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Entry
ERS451415_05073 CDS
T04522
Symbol
alkA_2
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Pathway
axx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ERS451415_05073 (alkA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
axx03000
]
ERS451415_05073 (alkA_2)
03400 DNA repair and recombination proteins [BR:
axx03400
]
ERS451415_05073 (alkA_2)
Enzymes [BR:
axx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ERS451415_05073 (alkA_2)
Transcription factors [BR:
axx03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ERS451415_05073 (alkA_2)
DNA repair and recombination proteins [BR:
axx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ERS451415_05073 (alkA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
CKI09201
LinkDB
All DBs
Position
1:5553335..5554792
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AA seq
485 aa
AA seq
DB search
MDRMNLDHDACYSAIRVRDARYDGRFFTAVKTTRIYCRPVCPARTPLSRNVVFYPTAAAA
QEAGFHPCLRCRPETAPAAGRGRDLPDGVARALGLIELGALDDAGVDALAARLGVGERQL
RRQFRQHLGASPVAVAQTRRVLLAKQLIHETRLPMAEIAFAAGFGSIRRFNEIFLALFGR
APGELRRSGKPDVPAGPQGEIKLLLRYRPPYDWPAMLDFLRVRAIPGIERVTDDSYTRTI
GLDGGQGTVRVEPGPGNALRATVRFPQLHALPTIIARLRRVFDLASDPAALAAQLAHDPV
MAALTAARPGLRVPGAWDGFELALRAVLGQQITVGAAIKLAGKLVAAYGQPLDQPDGDLT
HLFPTPAAVAPADLAPLGMPRTRAATLSAVAAAALADPRLFDTADCLDNAVTRLRTLRGV
GEWTAQYIALRQLREPDAFPASDIGLIRALEKLENRQYTPAQLLARAEAWRPWRAYAAQH
LWAEY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcatgaacctcgaccacgacgcctgctacagcgccatccgcgtgcgcgacgcc
cgttacgacggccgcttcttcaccgccgtcaagaccacgcgcatctattgccgcccggtc
tgcccggcgcgcacgccgctgtcgcgcaatgttgtcttctacccgacggcggccgccgcc
caggaagcgggtttccatccctgcctgcgctgccggcccgaaaccgcgcccgccgccggc
cgcggccgcgacctgcccgacggcgtcgcgcgcgccctcggcctgatcgaactcggcgcg
ctcgacgacgccggcgtcgacgccctggccgcgcgcctgggcgtcggcgaacgccagttg
cggcgccagttccgccagcacctgggggcttcgcccgtggccgtggcgcagacccggcgc
gtgttgctggccaagcagctgatccacgaaacccgcctgcccatggccgagatcgcgttt
gccgccggcttcggcagcatccgccgcttcaacgagatcttcctggccctgttcggccgc
gccccgggcgaactgcggcgctccggcaagcccgatgtcccggccggcccgcagggcgaa
atcaagctgctgctgcgctaccgcccgccctacgactggcccgccatgctggacttcctg
cgcgtgcgcgccatccccggcatcgaacgggtcacggacgacagctacacgcgcaccatc
ggcctggacggcggccagggcaccgtgcgggtcgaacccggcccgggcaacgcgctgcga
gccaccgtccgcttcccccagctgcatgccctgcccaccatcatcgcgcgcctgcgccgc
gtcttcgacctggccagcgaccccgccgcgctcgccgcgcaactggcccacgaccccgtc
atggccgccctcaccgccgcccgtcccggcctgcgcgtgcccggcgcctgggatggcttc
gaactcgccctgcgcgccgtcctcggccagcagatcaccgtcggcgccgccatcaagctc
gccggcaaactcgtcgccgcttacggccagcccctggaccagcccgacggcgacctgacc
cacctgttcccgacgccggccgccgtcgcccccgccgacctcgccccgctcggcatgccc
cgcacgcgcgccgccaccctctccgccgtcgccgccgcggccctggccgacccccgcctg
ttcgacaccgccgactgcctcgacaacgccgtcacccgccttcgcaccctgcgcggcgtc
ggcgaatggaccgcccaatacatcgccctgcgccagctacgcgaacccgacgccttcccc
gcctccgacatcggcctgatccgcgccctggaaaaactggaaaaccgccaatacaccccc
gcccagctcctggcccgcgccgaagcctggcgcccctggcgcgcctatgcggcccagcac
ttgtgggcggaatattga
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