Achromobacter xylosoxidans NCTC10807: ERS451415_05612
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Entry
ERS451415_05612 CDS
T04522
Symbol
ligT
Name
(GenBank) 2'-5'-RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
axx03016
]
ERS451415_05612 (ligT)
Enzymes [BR:
axx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ERS451415_05612 (ligT)
Transfer RNA biogenesis [BR:
axx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ERS451415_05612 (ligT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
CKI18299
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All DBs
Position
1:6159272..6159802
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AA seq
176 aa
AA seq
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MSPIRLFYALWPDTPLANTLSTWATQAQLHSRGRAMRTETLHMTLAFLGSVEKEIADELI
DATPYHRLQPGTVTLDRYGVFARPRILWAGPAQTPDSLQASHDGLWLWLSAFGFVPPAQP
FRPHVTLLRNIERNDPPADAPPSLTWHYDRMVLVASESTDGGSRYRVVARSKPQPG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatccgcctcttctacgccctctggcccgacacccccctggccaacacgctg
tccacctgggccactcaagcccaactgcacagccgcggccgcgccatgcgcacggaaacc
ctgcacatgacgctggccttcctgggctccgtggaaaaggaaatcgccgacgaactcatc
gacgccaccccctaccaccgcctgcagcccggcaccgtcaccctcgaccgctacggcgtc
ttcgcccgccctcgcattctctgggcaggccccgcgcagaccccggattcgctccaggcc
agccatgacggcctgtggctgtggctgtcagccttcggcttcgtgccgcccgcccagccg
ttccgcccccacgtcacactgctgcgcaacatcgagcgcaacgacccgcccgccgacgcc
ccgccgtccctgacctggcactacgaccgcatggtgctggtggcatccgaatccaccgac
ggcggcagccgctaccgcgtcgtcgcccgctcgaaaccgcaaccgggctga
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