Achromobacter xylosoxidans NCTC10807: ERS451415_05990
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Entry
ERS451415_05990 CDS
T04522
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Pathway
axx00300
Lysine biosynthesis
axx00470
D-Amino acid metabolism
axx01100
Metabolic pathways
axx01110
Biosynthesis of secondary metabolites
axx01120
Microbial metabolism in diverse environments
axx01230
Biosynthesis of amino acids
Module
axx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ERS451415_05990 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ERS451415_05990 (dapF)
Enzymes [BR:
axx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ERS451415_05990 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
CKI23694
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All DBs
Position
1:6581467..6582378
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AA seq
303 aa
AA seq
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MGDNPPMNWNFTKMHGAGNDFVVLDGVRQAIEMTPERARALGDRHFGIGADQILLVERAT
RPDADFRYRIFNADGSEVEHCGNGARCFVRFVHEQGLSDRNPLRAEIATGILVLDEGDDE
QVTVDMGSTRFDPAVLPFDTTGLASRTEGQDTLWQLELDVPAGLPRSVALSAVAISNPHA
VQVVDNVDTAPVAIVGPLIENHPRFARRVNAGFMQIVDRHSIRLRVHERGAGETLACGTG
ACAAVAAGIRRGLLDSPVRVQTRGGVLTIAWNGEQLRLTGPAESVFTGQVDIDKLVFSMA
LNR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataatcctcccatgaactggaatttcaccaaaatgcatggcgcgggcaacgat
ttcgtcgtcctggacggtgtccgccaggccatcgaaatgacgcccgagcgcgcccgcgcc
ctcggcgaccgccatttcggcatcggcgccgaccagatcctgctggtcgaacgcgccacc
cggcccgatgccgacttccgctaccgcatcttcaatgccgacggcagcgaggtcgagcat
tgcggcaatggcgcccgctgtttcgtgcgcttcgtgcatgaacaaggcctgtccgaccgt
aacccgctgcgcgccgaaatcgccaccggcatcctggtgctggacgaaggcgacgacgaa
caggtcaccgtcgacatgggcagcacccgtttcgacccggccgtgttgccgttcgacacc
accggcctggcctcgcgcaccgaaggccaggacacgctctggcagctggagctcgacgtg
cccgccggcctgccgcgcagcgtggccctgtcggccgtggccatttccaatccgcacgcc
gtgcaggtggtggacaacgtcgacaccgcgcccgtcgccatcgtcggcccgctgatcgaa
aaccatcctcgcttcgcccgccgcgtcaacgccggcttcatgcagatcgtcgatcgccac
agcatccgcctgcgcgtgcatgagcgcggcgccggcgagacgctggcctgcggcaccggc
gcctgcgccgccgtcgctgccggcatccgccgcggtctgctcgactccccggtgcgcgtg
cagacgcgcggcggcgtgctgaccatcgcctggaatggcgaacaactgcgcttgaccggc
cctgccgaatccgtcttcacgggccaggtcgatatcgacaagctcgtcttctccatggcg
ctgaaccgctga
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