Achromobacter xylosoxidans NCTC10807: ERS451415_06159
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Entry
ERS451415_06159 CDS
T04522
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Pathway
axx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ERS451415_06159 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axx03021
]
ERS451415_06159 (rpoB)
03400 DNA repair and recombination proteins [BR:
axx03400
]
ERS451415_06159 (rpoB)
Enzymes [BR:
axx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ERS451415_06159 (rpoB)
Transcription machinery [BR:
axx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ERS451415_06159 (rpoB)
DNA repair and recombination proteins [BR:
axx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ERS451415_06159 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
BSH_YknX
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
CKI26104
UniProt:
A0A0D6IX87
LinkDB
All DBs
Position
1:complement(6751552..6755664)
Genome browser
AA seq
1370 aa
AA seq
DB search
MPYSYTEKKRIRKSFAKREDVQNVPFLLATQLQSYLTFLQADTAPSDRVADGLQAAFSSI
FPIVSHNGMARLEFVSYVLGEPVFDVKECQQRGLTYASPLRAKVRLVLLDREVSKPTVKE
VKEQEVYMGEIPLMTGTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARV
IPYRGSWLDFEFDPKDILFFRVDRRRKMPVTILCKAIGMTPESILANFFDFDNFELKSEG
AMMEFVPERWKGEMARFDIADRSGKVIVEKDKRINAKHLRDLAAGGIQRISVPEDFLYGR
VLAKNIVDADTGEVIANANDEITESVLGALRAANVHDIQTLYTNDLDRGPYISQTLRTDE
TADQMAARVAIYRMMRPGEPPTEEAVEALFQRLFYSEETYDLSRVGRMKVNSRLGRGEDI
TGPMTLTNEDILETIKVLVELRNGRGQIDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAETENLMPHDLINSKPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSMALYARLNEYGFLETPYRKI
VDGRVSDQIDYLSAIEESHYVIAQANAALDEEGKFVDDLVACREAGETMLTAPANVHYMD
VAPSQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPVVGTGIERTVAVDSGT
TVQALRGGLVDHVDAERVVIRVNDEENVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKRG
DRVAKGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSVHIE
ELTVVARDTKLGPEEITRDISNLAETQLNRLDDSGITYIGAEVSADDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMTGTVIDVQVFTREGIVRDKRAQSIIDDELR
RYRQDLNDQLRIVENDQFDRIEKMLVGKTVNGGPRKLAKGATITKAYLADLDRWQWFDIR
LADEPHAVVLEQAKESLEQKRHQFDLAFEEKRKKLTQGDELPPGVLKMIKVYLAVKRRLQ
PGDKMAGRHGNKGVVSRITPVEDMPHMADGTPADIVLNPLGVPSRMNVGQVLEVHLGWAA
KGVGHRIADMLRDERTAQVKNVRAYLDKVYNTTGTGARIDELTDEEVMEMAQNLKNGVPF
ATPVFDGATEEEITKMLELAYPDDVAKRMALTPSRTQAWLYDGRTGEKFERPVTVGYMHY
LKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLT
VKSDDITGRTKVYENIVKGDHVIDAGMPESFNVLVKEIRSLALDMDLERN
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgccttactcgtacaccgaaaaaaagcgcatccgcaaaagcttcgccaagcgtgaagac
gttcaaaacgttcccttccttttggcgactcagcttcaatcctacctaactttcctgcag
gcggataccgccccgtccgatcgcgtagccgacggtttgcaggcggcgttttcgtcgatt
ttcccgatcgttagtcacaacggtatggcgcgcttggagttcgtgagctatgtgctcggc
gaaccggtgttcgatgtcaaggaatgtcagcaacgtggcctgacctatgcctcgcccctg
cgagccaaggtccgcctggtgctgcttgaccgcgaagtcagcaagcccaccgtcaaggaa
gtgaaggaacaggaagtctacatgggcgagattccgctcatgaccggcaccggttcgttc
gtcatcaacggcaccgaacgtgtcatcgtctcgcagctgcaccgctcgcctggcgtgttc
ttcgagcacgaccgcggcaagacgcacagctcgggcaagctgctgttctcggcccgcgtg
attccctaccgcggttcgtggctggatttcgaattcgaccccaaggacatcctgttcttc
cgcgtcgaccgtcgccgcaagatgcctgtcaccatcctgtgcaaggccatcggcatgacg
ccggaatcgatcctggccaacttcttcgacttcgacaacttcgagttgaagagcgaaggc
gccatgatggaattcgtgcccgagcgctggaagggcgaaatggcccgcttcgacatcgcg
gaccgttcgggcaaggtcatcgtcgagaaagacaagcgtatcaacgccaagcacctgcgc
gacctggctgccggcggcatccagcgcatctccgtgccggaagacttcctgtacggccgc
gtgctggccaagaacatcgttgacgccgataccggcgaagtcatcgccaacgccaacgac
gagatcaccgaaagcgtgctgggcgccctgcgcgccgccaacgtgcacgacatccagacg
ctctacacgaacgacctggatcgcggcccgtacatttcgcaaacgctgcgcaccgatgaa
accgccgaccagatggccgcgcgcgttgccatctaccgcatgatgcgtcctggtgaaccg
cccaccgaagaagcggtggaagcgctgttccagcgcctgttctacagcgaagaaacgtac
gacctgtcgcgcgtcggtcgcatgaaggtcaacagccgcctgggccgtggtgaggacatc
accggcccgatgacgctgaccaacgaagacatccttgaaaccatcaaggtgctggtcgag
ctgcgtaacggccgtggccagatcgacgatatcgatcacctgggcaaccgccgcgtgcgt
tgcgtcggcgaactggccgagaaccagttccgcgccggcctcgtgcgcgtcgaacgcgcc
gtcaaggaacgtctgggccaggccgagaccgaaaacctgatgccgcacgacctgatcaac
tccaagccgatctcggccgccatcaaggagttcttcggttcgagccagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgtcgtgtttcggcactgggc
ccgggcggtctgacccgcgagcgcgccggcttcgaagtgcgtgacgtgcacccgacccac
tacggccgcgtctgcccgatcgaaacgccggaaggcccgaacatcggcctgatcaactcc
atggcgctgtacgctcgcctgaacgagtacggcttcctggaaacgccttaccgcaagatc
gtcgacggccgcgtcagcgaccagatcgactacctgtcggccatcgaagaaagccactac
gtcatcgcgcaggccaacgccgcactggacgaggaaggcaagttcgtggacgacctggtg
gcttgccgtgaagccggcgaaaccatgctgaccgccccggccaacgtgcactacatggac
gtggccccgtcgcagatcgtgtcggtcgccgcctcgctgattccgttcctggagcacgac
gacgcgaaccgcgcgctgatgggcgccaacatgcaacgtcaggccgtgccttgcctgcgt
ccggaaaagccggtcgtgggcacgggtatcgagcgcaccgtggccgttgactcgggcacc
accgtgcaggcgctgcgtggcggcctggtcgaccacgtcgacgccgaacgcgtggtgatc
cgcgtgaacgacgaagaaaacgtcgccggcgaagtcggtgtcgacatctacaacctgatc
aagtacacgcgttccaaccagaacacgaacatcaaccagcgtcccatcgtcaagcgtggc
gaccgtgtcgccaagggtgacgtgctggccgacggcgcatcgacggacctgggcgaactc
gccctgggccagaacatgctgatcgcgttcatgccctggaacggctacaacttcgaagac
tcgatcctgatctccgaaaaggtcgtggccgatgaccgctacacctcggtgcacatcgag
gaactgacggttgtcgctcgcgataccaagctgggtccggaagaaatcacgcgcgacatc
agcaacctggccgagacgcaactgaaccgcctggacgattcgggcatcacatacatcggc
gccgaagtcagcgccgacgacgtgctggtcggcaaggtcacgcccaagggcgaaacccag
ctgacgccggaagaaaagctgctgcgcgccatcttcggtgaaaaggcgtccgacgttaag
gacacctcgctgcgcgtgccttcgggcatgaccggcaccgtgatcgacgtgcaggtgttc
acgcgcgaaggcatcgtgcgcgacaagcgcgcccagtccatcatcgacgatgaactgcgc
cgctatcgccaggacctgaacgaccagctgcgcatcgttgaaaacgaccagttcgaccgt
atcgagaagatgctggtcggcaagaccgtcaacggcggcccgcgcaagctggccaagggc
gccacgatcaccaaggcttacctggctgatctggaccgctggcagtggttcgacatccgc
ctggccgacgagccccacgccgtggtgctggagcaggccaaggaatcgctcgagcagaag
cgtcaccagttcgacctggccttcgaagagaagcgcaagaagctgacgcagggcgacgag
ctgcccccgggcgtgctgaagatgatcaaggtctacctggccgtgaagcgtcgtctgcag
cctggcgacaagatggcaggccgtcacggcaacaagggcgtggtctcgcgcatcaccccg
gtggaagacatgccgcacatggctgacggcacgccggccgacatcgttctgaacccgctg
ggcgtgccctcgcggatgaacgtgggccaggtgctggaagtgcacttgggctgggctgcc
aagggcgtgggtcaccgcatcgccgacatgctgcgcgacgagcgcaccgcgcaggtcaag
aacgtccgcgcttacctggacaaggtctacaacacgaccggcaccggcgcgcgcatcgac
gagctgaccgacgaagaagtcatggaaatggcccagaacctcaagaacggcgtgccgttc
gcgacgcccgtcttcgacggcgcgaccgaagaggaaatcaccaagatgctggaactggcc
tatccggacgacgtcgccaagcgcatggcgctgacgccctcgcgcacgcaggcgtggctg
tacgacggccgcaccggcgagaagttcgagcgtccggtcaccgtcggctacatgcactac
ctgaagctgcaccacttggtcgacgacaagatgcacgcgcgttcgaccggcccgtactcg
ctcgtgacccagcagccgctgggcggcaaggcgcagttcggtggccagcgtttcggggaa
atggaagtgtgggcgctggaagcctacggcgccgcctacaccctgcaggaaatgctgacg
gtgaagtccgacgacatcaccggccgcaccaaggtatacgaaaacatcgtcaagggcgat
cacgtcatcgatgccggcatgccggaatcgttcaacgtgctggtcaaggaaatccgctcg
ttggccctggacatggatttggagcgtaactaa
DBGET
integrated database retrieval system
