Achromobacter xylosoxidans A8: AXYL_00619
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Entry
AXYL_00619 CDS
T01341
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
axy
Achromobacter xylosoxidans A8
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
axy03016
]
AXYL_00619
Enzymes [BR:
axy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AXYL_00619
Transfer RNA biogenesis [BR:
axy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AXYL_00619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
DUF7691
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
ADP13977
UniProt:
E3HE67
LinkDB
All DBs
Position
complement(662061..663965)
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AA seq
634 aa
AA seq
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MYVFYEDDGSFKAGNILSETDASLQVESESGKRSKIKRANTLFTFAAPEPAALMSQAAAT
AETLDLQFLWECAPQEEFDSPALAADYFGHAPTPVEQAALLMRLHGAPAYFHRRGKGSYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQAAESLLIRPDKNSQQWKA
LDAACAKLGKSPDRLLLELGAWPHALALHKRRFLAVNFPRGLAFPDLELPPIDRELPLSD
AEIYSVDDVTTTEIDDALSVSTLPDGRLRVGVHVAAPGITVTRDSDFDKLARARLSTVYM
PGDKIPMQPDSIIQAFSLDAGREVPALSLYVVADPETGEIIESETRLERIVVRENLRHNM
LDAQVTEASLSDPSADLPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLHQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQHNVTRTVAHVLRDDLVRFANAPLVTRVGGMPELER
GTAVEIDILGMDELSLELDCRYIGEISPAVGGQE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggcaatatcctgtccgagacc
gatgccagcctgcaggtggaatcggaatccggcaagcgcagcaagatcaagcgcgccaat
accttgttcaccttcgcggcgcccgaaccggccgcgctgatgagccaggcggccgcgacc
gccgaaacgctggacctgcaattcctgtgggaatgcgcgccgcaggaagaattcgactct
cccgccctggccgccgactacttcggccacgcccccacgcccgtggaacaggccgccctc
ttgatgcgcctgcacggcgcgccggcctatttccaccgccgcggcaaggggagctaccgc
cccgcgccacccgacattctggccgccgccctggccgcgctggaaaagaaacagcgccag
gccgagcagcagcaggaatgggtggatgaaatggccgcggggcgcctgcccgagcccatc
gcccaggccgcggaatcgctcctgatccgccccgacaagaattcgcagcaatggaaggcg
ctggacgccgcctgcgccaagctgggcaagagccccgaccgcctgctgctggaactgggc
gcctggccacacgcgctggcgctgcacaagcgccgtttcctggcggtgaatttcccgcgc
ggattggcgttcccggacctggaactgccgcccatcgaccgcgagctgccgctgtccgac
gccgaaatctattcggtggacgacgtcaccaccaccgaaatcgacgacgccctgtccgtc
tccaccttgcccgacggccgtctgcgcgtcggcgtgcacgtggcggcgccgggcatcacc
gtgacccgcgacagcgatttcgacaagctggcgcgcgcccgcctgtccaccgtctacatg
ccgggcgacaagatcccgatgcagccggacagcatcatccaggcgttctcgctggacgcc
ggccgcgaagtgccggcgctgtccctgtacgtcgtggccgatccggaaaccggcgaaatc
atcgaatcggaaacccgcctggaacgtatcgtggtgcgcgagaacctgcgccacaacatg
ctggacgctcaggtcacggaagccagcctgtccgatccgtcggccgacctgccctatggc
cattggctgcgcccgctgtggaagctggcgcaggccctgtcggcgcaacgcgaaaacgtg
cgcggcaagccggagaacaattcccgggtggagtacagcttctacctggatggcaacccc
gacgatcccgacacgccggtgcgcctggtgccgcgccagcgcaacgcgccgttggaccgc
atggtggcggaatacatgatcctggcgaacaacctctggggcggcctgctgcaccagcat
ggcgtgccgggcatctaccgctcgcaacaggcgggccgcgtgcgcatgagcacccaggcc
ttgccgcacgaggccatcggggtgccgcaatacgcctggagcacctcgccgctgcgccgc
tacgtggacctggtcaaccagtggcaactgatcgcagcagtcgagcacggcgtgtccgcc
cgcctggtcgccccgttcaagccgcgcgacgcggacctgttcgccatcatcggcgccttc
gacgcgcaatacgcggcctgggcggagttccagagcgcgatggagcgctactggtgcctg
cgctggctgaagcagcacaacgtgacgcgtaccgtggcgcacgtgctgcgcgatgacctg
gtgcggttcgcgaatgcgccgctggtgactcgggttggggggatgccggagctggagcgc
gggactgcagtggagatcgatattctggggatggatgagttgtctctggagctggattgc
cggtatatcggggagattagtcctgctgtgggtgggcaggagtag
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