Achromobacter xylosoxidans A8: AXYL_00982
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Entry
AXYL_00982 CDS
T01341
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
axy
Achromobacter xylosoxidans A8
Pathway
axy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXYL_00982 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axy03019
]
AXYL_00982 (recQ)
03400 DNA repair and recombination proteins [BR:
axy03400
]
AXYL_00982 (recQ)
Enzymes [BR:
axy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXYL_00982 (recQ)
Messenger RNA biogenesis [BR:
axy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXYL_00982 (recQ)
DNA repair and recombination proteins [BR:
axy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXYL_00982 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ADP14330
UniProt:
E3HIP5
LinkDB
All DBs
Position
complement(1059466..1061295)
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AA seq
609 aa
AA seq
DB search
MSDARALGVLQRVFGYESFRGDQQAIVEQVIDGGDALVLMPTGGGKSLCYQIPSLVREGT
GIVVSPLIALMQDQVDALTELGVRAAFLNSTQEWRVARDVEQAFLAGELDLLYVAPERLL
TDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHERWPDVPRIALTATATAD
TRSEIAQRLSLDDARHFVSSFDRPNIRYRIIEKNEVRKQLLDMIQTDHEGESGVVYCLSR
ARVEETAEFLCNQGIDAMPYHAGLSAQVRAANQSRFLREDAVVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGDESYRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQQITACGNCDVCLEPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKITDRTKQHGHETLSVFGVGADLSDTAWRGVLRQLLAQGLL
TVDHEGYGTLALTEGSRAVLKGERQLMLRRESEKKPRSGKTGSGRPKAAAIDLPAELQPV
FEALRAWRGEVAKSHGVPAYVIFHDATLREIALAQPESMDDLSHISGVGARKLEAYGEEI
LQRVAKPVL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcgcgccctcggcgtgttgcagcgcgttttcggttacgaatccttccgc
ggcgaccagcaagccattgtcgaacaggtgatcgacggcggcgacgcgctggtcctcatg
cctaccggcggcggcaagtcgctctgttaccagattccctcgctggtgcgcgaaggtacc
ggcattgtcgtatcgccgctgatcgcgctgatgcaggaccaggtcgacgccctgaccgaa
ctgggcgttcgcgcggccttcctgaattccacccaggagtggcgggtcgcccgcgacgtc
gagcaggccttcctggccggcgagctggacctgctgtacgtggcgcccgaacgcctgctg
accgaccgctgcctgcaactgctggaacgcggccgcatcgcgctgttcgccatcgacgag
gcccactgcgtgtcccaatggggtcacgacttccgtcccgaatacctgggcctgtcgatg
ctgcacgagcgctggcccgacgtgccgcgcatcgcgctcaccgccaccgccaccgccgac
acgcgcagcgagatcgcccagcgcctgtcgctggacgacgcgcgccacttcgtttccagc
ttcgaccgccccaacatccgctaccgcatcatcgaaaagaacgaggtgcgcaagcagttg
ctggacatgatccagaccgatcacgagggcgaatccggcgtggtctactgcctgtcgcgg
gcccgcgtcgaagaaaccgctgagttcctgtgcaaccagggcatcgacgcgatgccctat
cacgcgggcctcagcgcgcaggtgcgcgccgccaaccagtcgcgcttcctgcgcgaggac
gccgtggtcatggtggccaccatcgccttcggcatgggcatcgacaagcccgacgtgcgc
ttcgtggcgcacatcgacctgcccaagtccgtggaaggctattaccaggaaaccggccgc
gccggccgcgacggcctgccggccacggcctggctggcctacggcttgcaagacgtggtg
cagcagcgccgcatgatcgatgaatcgcccggcgacgagtcctaccgcaggcgcctgggc
cagcagctggacgccatgctggggctgtgcgaaacggtggaatgccggcgcgtgcgcctg
ctggcctacttcggccagcagatcacggcctgcggcaattgcgacgtctgcctggagccg
ccccaggcctgggacggcacggtcgcggcgcaaaaggtactgtccgccgtctaccgacta
tggaaggaacgcggccagcgctatggcgcggggcacatcatcgacatcctgcgcggcaag
atcaccgaccgcaccaagcagcacggccacgaaacgctgagcgtattcggcgtgggcgcg
gacctgagcgacaccgcctggcgcggcgtgctgcgccaattgctggcgcaaggcctgctg
acggtggaccacgaaggctacggcaccctggccctgaccgaaggcagccgggccgtgctc
aagggtgaacggcaactgatgctgcgtcgggaatccgaaaagaaaccgcgttcgggcaag
accggcagcggccgccccaaggcggcggccatcgacctgccggccgaactgcaacccgta
ttcgaggccctgcgcgcctggcgcggcgaagtggccaagagccatggcgtgccggcctac
gtcatcttccacgacgccacgctgcgcgagatcgcgctggcccagcccgaatcaatggac
gacctgagtcacatcagcggcgtgggcgcccgcaagctggaagcctacggcgaagaaatc
ctgcagcgcgtggccaagccggtcttgtga
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