Achromobacter xylosoxidans A8: AXYL_01015
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Entry
AXYL_01015 CDS
T01341
Symbol
rhlE2
Name
(GenBank) ATP-dependent RNA helicase RhlE 2
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
axy
Achromobacter xylosoxidans A8
Pathway
axy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXYL_01015 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axy03019
]
AXYL_01015 (rhlE2)
Enzymes [BR:
axy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AXYL_01015 (rhlE2)
Messenger RNA biogenesis [BR:
axy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXYL_01015 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
LBP_BPI_CETP_C
Motif
Other DBs
NCBI-ProteinID:
ADP14363
UniProt:
E3HJN8
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All DBs
Position
1094361..1095842
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AA seq
493 aa
AA seq
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MTESTQSVAPAADAPAPTFTDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVVEGRDVMGA
AQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESVKRYSKQT
PLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQKNVNLSQVGILVLDEADRML
DMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATANTITQ
IAYKMPSDAKRAAVVHLVKSRGLNQVIVFSNTKIGTARLARDLERDGVKAESIHGDKTQA
DRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGAS
GEAIALFTPDEERFLLDIEKLIKREVPRGTLDVPAELVARSHRRSDEHRGSSSREGREGR
EGRDSRGDRGRSSDRRSGYSSGASRQPVDDFFLKPYEPSAPSAPADEPAPRSNGASAGPK
RQIAVLLGGSRKP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatccactcaatccgtagcacccgccgctgacgcgcccgcgccgacgttcact
gatttcggtctgcatcccctgctgctgcagtccatcgccgaaaccggctacaccaccccc
acgcccatccaggcccaggccatccccgtcgtggtggaagggcgcgacgtcatgggcgcg
gcccagaccggcaccggcaagacggccgctttcacgctgcccatcctgcaccgcctcatg
ccgctggccaacaccagcgcatcgcccgcgcgccatccggtgcgcgcgctgatcctgacg
cccacgcgcgagctggctgaccaggtctacgaaagcgtcaagcgctacagcaagcagacg
ccgctgcgttcggcggtggtgttcggcggcgtggatatcggtccgcagaaggaagccctg
cgccgtggttgcgaagtgctggtggccacgcccggccgcctgctcgaccacgtcgagcaa
aagaacgtgaacctgagccaggtcggcatcctggtgctggacgaagccgaccgcatgctg
gacatgggcttcctgcccgacctggaacgcatcatccgcctgctgcccgcgcagcgccag
ggcctgctgttctccgcgacgttcagcaatgaaatccgcaagctcggccgctcgtacctg
aatcatccggtcgaaatcgaagtcgcggcgcgcaacgccaccgccaacacgatcacccag
atcgcctacaagatgcccagcgacgccaagcgcgccgcggtcgtgcacctggtgaagtcg
cgcggcctgaaccaggtcatcgtgttctccaacaccaagatcggcacggcgcggctggcc
cgcgacctggaacgcgatggcgtcaaggccgagtcgatccatggcgacaagacgcaggcc
gaccgcatgaaggcgctggaagccttcaaggccggcgaactggaagtgctggtggccacc
gacgtggccgcgcgcggcctggacgtggccggcgtgccctgcgtcatcaactatgacctg
ccgtacaacgccgaagactacgtgcaccgtatcggccgtaccggccgtgccggcgcctcg
ggcgaggccatcgccttgttcacgcccgacgaagagcgtttcctgctcgacatcgaaaaa
ctcatcaagcgcgaagtgccgcgcggcaccctcgacgtgccggccgaactggtcgcgcgc
agccaccgccgcagcgacgagcaccgcggttcgtcctcgcgtgaaggtcgtgaaggtcgt
gaaggccgcgacagccgtggtgatcgcggccgttcgtccgaccgccgctccggctactcg
tccggggcgtcgcgccagcccgtggacgatttcttcctcaagccctacgagccctcggcc
ccgtccgcaccggccgacgagccggcgcccaggagcaacggcgcatccgccgggccgaag
cgccagatcgccgtcttgctcggcggcagccgcaagccctga
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