Achromobacter xylosoxidans A8: AXYL_01244
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Entry
AXYL_01244 CDS
T01341
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
axy
Achromobacter xylosoxidans A8
Pathway
axy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXYL_01244 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
axy03019
]
AXYL_01244 (pnp)
03016 Transfer RNA biogenesis [BR:
axy03016
]
AXYL_01244 (pnp)
Enzymes [BR:
axy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AXYL_01244 (pnp)
Messenger RNA biogenesis [BR:
axy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXYL_01244 (pnp)
Transfer RNA biogenesis [BR:
axy03016
]
Prokaryotic type
tRNA degradation factors
AXYL_01244 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ADP14584
UniProt:
E3HN67
LinkDB
All DBs
Position
1314765..1316927
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVASKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGQYAINPTASQLKSSKLDLVVA
GTENAVLMVESEADQLSEEIMLGGVVYGHQQMQAVINAIHELVKDAGKPDWDWQAPAKDE
ALIAAVTAAAQEGLNAAYQIREKQARTTKLREVSADVSAKLAAAAAEKGEALPDAVTVDN
IMFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMMHYNMPPFATGETGRIGVPKRREIGHGRLAKRSLIPLL
PAPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMKEALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQIYEGAVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEQQQAAAAPEAAPQSEPQAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtgacaaaatcgttccagtacggccagcacacggtcgtcctggaaact
ggcgaaatcgctcgccaggcctccggcgccgtggtggtgtcgatcgaggacaccgtcgtc
ctggccaccgtcgtggcttccaagaaggccaagccgggtcaaacgtttttcccgctgacc
gttgactacatcgagaagacctacgccgccggccgtattccgggcgggttcttcaagcgc
gaaggcaagccctccgagaaggaaacgctgacctcgcgcctgatcgatcgtcccctgcgt
ccgctgttccccgaagacttctacaacgaagtccaggtggtcatccacacgctgtcggtc
aatcccgagatcgatcccgacatcgccgccatgatcggcgcctcggccgcgctggccatt
tcgggcatcccgttcaacggcccgatcggcgccgcgcgcgtgggttacatcgatggccag
tacgccatcaacccgaccgcctcgcaactgaagtcgtccaagctggacctggttgtcgcc
ggtaccgaaaacgccgtgctgatggtggaatcggaagccgaccagctgtccgaagaaatc
atgctgggtggcgtggtctacggccaccagcaaatgcaggccgtcatcaacgccatccac
gaactggtcaaggacgccggcaagcccgattgggactggcaagctcctgccaaggacgag
gccctgatcgccgcggtcaccgccgctgcccaggaaggcctgaacgccgcctaccagatc
cgcgaaaagcaggcccgcaccaccaagctgcgcgaagtgtcggctgacgtgtcggccaag
ctggctgccgccgccgccgaaaagggcgaagcgctgccggacgccgtgaccgtcgacaac
atcatgttctcgctggaatcggccatcgtccgcggccagatcctgaatggcgagccgcgc
atcgacggccgcgacacccgcaccgtgcgccccatcagcgtgcgtctgggcgtgctgccc
cgcgcacacggcagcgcgctgttcacccgtggtgaaacgcaagcgctggtcgtggccacg
ctgggcaccaagcaagacgaacagatcatcgacgcgctcatgggcgagtaccgcgaccgc
ttcatgatgcactacaacatgcctccgttcgccaccggcgaaacgggccgcatcggcgtg
cccaagcgccgcgaaatcggccacggccgcctcgccaagcgttcgctgatcccgctgctg
ccggctccggaagacttccagtacacgatccgtatcgtgtcggaaatcaccgagtccaac
ggctcgtcgtcgatggcttcggtctgcggcggctcgctggccatgatggacgccggcgtg
ccggtcaaggatcacgtggccggcgtggccatgggcctgatcctggacggcggcaagttc
gccgtgctgacggacatcctgggcgacgaagatcacctgggcgacatggacttcaaggtt
gcgggcaccgagaacggcgtcaccgcactgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaagtggcgctggctcaagcccgcgaaggccgcctgcacatcctgggc
aagatgaaggaagcgctggacggttcgcgtggcgagctgtcggctttcgctccccgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaagaaaccggcacgcagatcgacatctccgacgacggcacgatc
gtgattgccagcgtcgacgaagcgcaggccaaggaagcccagcgccgcatcgtcgagctg
accgccgacgtcgaagtgggccagatctacgaaggcgccgtgctgcgcctgctggatttc
ggcgccatcgtgcaagtgctgccgggccgcgacggtctgctgcacatctcggaaatcgcc
aactaccgcatcgccaacatcaacgatgtgctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtccatcaaggccatcggcggcatc
gagcagcagcaagccgctgcggctcccgaagctgccccgcaatcggaaccgcaagctgaa
taa
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