Achromobacter xylosoxidans A8: AXYL_01805
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Entry
AXYL_01805 CDS
T01341
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
axy
Achromobacter xylosoxidans A8
Pathway
axy03030
DNA replication
axy03410
Base excision repair
axy03420
Nucleotide excision repair
axy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXYL_01805 (polA)
03410 Base excision repair
AXYL_01805 (polA)
03420 Nucleotide excision repair
AXYL_01805 (polA)
03440 Homologous recombination
AXYL_01805 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
axy03032
]
AXYL_01805 (polA)
03400 DNA repair and recombination proteins [BR:
axy03400
]
AXYL_01805 (polA)
Enzymes [BR:
axy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXYL_01805 (polA)
DNA replication proteins [BR:
axy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AXYL_01805 (polA)
DNA repair and recombination proteins [BR:
axy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AXYL_01805 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXYL_01805 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ADP15139
UniProt:
E3HWU8
LinkDB
All DBs
Position
1925204..1927921
Genome browser
AA seq
905 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKAEYAACIFDA
RGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHSAVRALGWPVLAIEGVEADDVIGTLAKR
AAEHDVYTIVSTGDKDLAQLVNSHVTLVNTMTGEVLDEAGVVNKFGVPPDRIVDYLMLVG
DAVDNVPGVTKVGPKTAVKWLTEFGSIDKLVEGAEDIKGVAGSNLREAIPNFPLTRQLLT
VKYDCDLAGHVDAVDDLTPRPRDEATLTELYERYGFRTWLRDLTGDAERVPAGDARVAHE
APAAPVELDYQILSDWAAFDAWMEKLKDAPLVAVDTETTSLDEMQARMVGMSLAVSPGVA
CYIPVAHRGPDNAPQLPKAEVLARLKPWLEDATRAKLLHHAKYDAHVFANEGIKLAGITE
DTMLQAYVLESHRGVGLNDLAQRYLGRSGVSYEDLCGKGAKQIGFDEVAVDKAGHYAAED
SDFTLQLHQVLRPMVAADEGLNRIYLLEMQVSEVLTTVERNGVKVDAAELGRQSHKLGQE
MLQLEQKAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKTASGAPSTDEEVLSKLAQDYP
LPQVLLEYRGLSKLKSTYTDKLPRMINPNTGRVHTHYSQAAVITGRLASSDPNLQNIPVR
TEAGRRVREAFIAEQGMLLSADYSQIELRIMAHVSDDANLQRAFEAGEDIHRATASEVFG
VSLEDVSTEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAMYMD
DTRRRAREQGYVETVFGRRLQLPEIRGASGPRRQGAERAAINAPMQGTAADLIKMAMIAV
QDWLEAEKLQTRMIMQVHDELVLEAPDAELELVKEALPRLMCNVATLRVPLVAEVGMGKN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattactggtcgacggttcaagttacttgtaccgcgctttccacgct
atgcctgatttgcgcaacgcgcaaggcgaacccacgggggcgctttacggcgtggtgaat
atgctgcgcaaacttgtctctgatcataaggcagagtatgccgcatgtattttcgatgcc
cgcggcaagaccttccgggacgatctctacccggagtacaaatcgcaccgcccgcccatg
ccggaagacctggcggcgcagatcgagcccatccacagcgccgtgcgcgcgctgggctgg
ccggtgctggccatcgaaggggtcgaggccgacgatgtgatcggcaccctggccaagcgc
gccgccgagcacgacgtgtacaccatcgtgtccaccggcgacaaggacctggcgcagctg
gtcaacagccacgtcaccctggtcaacaccatgaccggcgaagtgctggacgaggccggc
gtggtcaacaagttcggcgtgccgcccgaccgcatcgtggattacctgatgctggtgggg
gacgcagtggacaacgtccccggcgtgaccaaggtgggtcccaagacggcggtcaaatgg
cttacggaattcggctcgattgacaagctggttgaaggggcggaagacatcaagggcgtc
gccggcagcaatctgcgcgaggccattccgaatttcccgctgacgcgccaattgctgacc
gtgaagtacgactgcgacctggccggccacgtggacgcggtggacgacctgacgccgcgc
ccgcgcgacgaggcgacgctgaccgagctctacgagcgctacggtttccgcacctggctg
cgcgacctgaccggcgacgctgaacgcgtgccggcgggcgatgcccgcgtcgcgcacgag
gcgcccgccgcgcccgtggaactggactatcagatcctctccgactgggccgcgttcgac
gcctggatggaaaagctgaaggacgcgccgctggtcgcggtggataccgagaccacttcg
ctggatgaaatgcaggcgcggatggtgggcatgtcgctggcggtgtcgcccggcgtggcg
tgctacatcccggtcgcgcaccgcggtccggacaacgcgccgcagttgcccaaggccgag
gtcctggcgcgcctgaagccctggctggaggacgctacgcgcgccaagctgctgcaccac
gccaagtacgacgcgcacgtgttcgccaacgaaggcatcaagctggccggcattaccgaa
gacacgatgctgcaggcctatgtgctggaatcgcatcgcggcgtcgggttgaacgacctg
gcccagcgctacctgggccgcagcggcgtgtcctacgaggacctctgcggcaagggcgcc
aagcagatcggctttgacgaagtggcggtggacaaggccggccactacgccgccgaggac
tcggacttcaccttgcagctgcatcaggtgctgcgcccgatggtggcggccgacgaaggg
cttaaccgcatctacctgctggaaatgcaggtgtctgaggtgctgaccacggtcgaacgc
aatggcgtcaaggtggatgccgcggaactggggcgccagagccataagctgggccaggaa
atgctgcagctcgagcagaaggcctatgaactggccggccagcccttcaacctgaattcc
cccaagcagctgggcgagatcctgttcggccgcatgcagctgccggtggtccgcaagacc
gccagcggcgcgccgtccaccgacgaagaagtgctgagcaagctggcgcaggattacccg
ctgccgcaagtgctgctggaataccgcggcctgtccaagctgaagtccacctacacggac
aagctgccgcgcatgatcaacccgaacaccggacgggtacacacgcattattcgcaggct
gcggtcatcaccggccgcctggcttcgtccgatcccaacctgcagaacatcccggtgcgc
accgaagccggccggcgcgtgcgcgaggcgttcattgccgagcagggcatgctgctgtcg
gccgactattcccagatcgagctgcgcatcatggcgcacgtgtcggacgacgccaatctg
cagcgcgccttcgaggcgggcgaggacatccaccgcgccacggcctccgaagttttcggc
gtgtcgctggaggacgtctccaccgagcagcgccgcgccgccaaggcgatcaacttcggc
ttgatctacggcatgggggtgttcggcctggcgtccaacctgggcatcacgcgcgatgcc
gcgcaggcctacatcgaccgctatttcgcccgctatcccggcgtggcgatgtacatggac
gacacccgccgccgcgcgcgcgaacagggctatgtggaaaccgtcttcggacgccgcctg
caactgccggaaatccgcggcgcttcgggcccgcgccgccagggggccgagcgcgccgcc
atcaacgcgccgatgcagggcacggcggccgacctgatcaagatggccatgatcgcggtg
caggactggctggaagcggaaaagctgcagacgcgcatgatcatgcaggtgcacgatgaa
ctggtgctggaagcgccggacgccgaactggaactggtcaaggaagcattgccgcgcctg
atgtgcaatgtggcgaccctgcgcgtgccgctggtggccgaggtgggcatgggcaagaac
tgggagcaggcccactaa
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