Achromobacter xylosoxidans A8: AXYL_02132
Help
Entry
AXYL_02132 CDS
T01341
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
axy
Achromobacter xylosoxidans A8
Pathway
axy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXYL_02132 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axy03021
]
AXYL_02132 (rho)
03019 Messenger RNA biogenesis [BR:
axy03019
]
AXYL_02132 (rho)
Transcription machinery [BR:
axy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AXYL_02132 (rho)
Messenger RNA biogenesis [BR:
axy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXYL_02132 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
Phostensin_N
Motif
Other DBs
NCBI-ProteinID:
ADP15456
UniProt:
E3HHS6
LinkDB
All DBs
Position
complement(2248761..2250020)
Genome browser
AA seq
419 aa
AA seq
DB search
MHLNELKALHVSQLLEMAAGLEIENANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GVAPEAIKHRIMFENLTPLHPNRTMRLERDIKSEENLTGRILDVFAPIGMGQRGLIVASP
KSGKTVMMQHIAHAITTNYPDAVMIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPSINL
NKSGTRREELLIAPDLLQKVWVLRKFIHDMDEVQSMEFILDKMRATKTNAEFFDMMKKK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaacgaactgaaggcgctgcacgtctcgcagctgctggaaatggccgccggc
ctggaaatcgagaacgccaaccgcctgcgcaagcaggaactgatgttcgccatcatgaaa
cggcgcgccaagcaaggcgagcagatcttcggcgacggcgtcctcgaagtcctacccgac
ggcttcggcttcctgcgctcgcccgagacctcgtatctggccagcacggacgatatctac
atctcgccctcgcagatccgccgcttcaacctgcacaccggcgactcgatcgaaggcgaa
gtgcgcacgcccaaggatggcgagcgctatttcgccctggtcaaggtcgacaaggtcaac
ggcgtggcgcctgaagcgatcaagcatcgcatcatgttcgaaaacctgacgccgctgcat
ccgaaccggaccatgcgcctggaacgcgacatcaagagcgaggaaaacctcacgggccgc
attcttgacgtcttcgcccccatcggcatgggccagcgcggcctgatcgtcgccagcccc
aagtccggcaagacggtgatgatgcagcacatcgcgcacgccatcaccaccaactacccc
gacgcggtcatgatcgtcctgctggtggacgagcgtcccgaggaagtgaccgaaatgcag
cgcacggtgcgcggcgaagtggtggcctcgaccttcgacgaacccgccacccgccacgtg
caggtcgcggaaatggtcatcgaaaaggccaagcgcctggtcgaaatgaagaaggacgtc
gtgatcctgctggactcgatcacccgtctggcccgcgcctacaacaccgtggtgccggct
tccggcaaggtgctgaccggcggcgtggacgccaacgcgctgcaacgccccaagcgcttc
ttcggcgccgcccgcaacctggaagaaggcggctcgctgaccatcctgggcaccgcgctg
atcgaaaccggcagccgcatggatgaagtcatctatgaagaattcaagggcaccggcaac
tccgaagtccacctcgagcgccgcctggctgaaaagcgcgtctacccgtcgatcaacctg
aacaagtccggcacccgccgcgaagaactgctgatcgcgccggacctgctgcagaaggtc
tgggtgctgcgcaagttcatccacgacatggacgaagtccagtccatggaattcatcctg
gacaagatgcgcgccaccaagaccaacgccgaattcttcgacatgatgaagaagaagtaa
DBGET
integrated database retrieval system
