Achromobacter xylosoxidans A8: AXYL_02188
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Entry
AXYL_02188 CDS
T01341
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
axy
Achromobacter xylosoxidans A8
Pathway
axy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXYL_02188 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axy03021
]
AXYL_02188 (rpoD)
Transcription machinery [BR:
axy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXYL_02188 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
Motif
Other DBs
NCBI-ProteinID:
ADP15512
UniProt:
E3HIU1
LinkDB
All DBs
Position
2313209..2315461
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AA seq
750 aa
AA seq
DB search
MTKSTGKSSSAIDAAETKATTAKRVVSMAAEKAPAKTAVKVAKPAAKKATKAAAADKPEK
VTKARAKKAEDKLADLVGSARPVPSGRRPGRPAKNANNDADGFDDSMDGEGEVLPDLKPP
KRGGKRGKADPKDLIARGPVTPEEYEARRNRLKQLIKLGKDRGYLTYGEINDHLPDDLVD
AEAIDGIISTFSDMGIAVYDQAPDAETLLMSENAPVASNDDDVEDEAEAALTTVDSDFGR
TTDPVRMYMREMGSVELLTREGEIEIAKRIEDGLKHMVMAISACPTTINEILAHILRVRE
GQAQIDEVVDGLVDPEDGEEYAGAGVTAEEDEGDDGPAGGMSSKQLEDLRVKALAKFDEV
GKQFEKMRHSYEKDGYKSDVYVRAQESIQNELMGIRFTAKMVEKLADTLRQQVEEVRQLE
RAVLHTCVDRAGMPRTHFIKVFPGNETNMQWVVDEVAAGHPYAETLERQIPAVQELQQKL
IDLQTRVVLPLKDLKDVNKRMATGEAKARKAKREMTEANLRLVISIAKKYTNRGLQFLDL
IQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMN
RISRQILQETGAEPDPATLAQKMDMPEDKIRKILKIAKEPISMETPIGDDDDSHLGDFIE
DTSTLAPSDAALHGSMRDVVKEVLDSLTPREAKVLRMRFGIEMSTDQTLEEVGKQFDVTR
ERIRQIEAKALRKLRHPSRADKLKSFLEGQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccaccggcaaatcctcctctgcaattgatgcggccgaaaccaaggccacc
acggccaagcgcgtcgtaagcatggcagcggaaaaggcgcccgccaagacggcggtgaag
gtcgccaagcccgccgccaagaaggcgaccaaggctgccgcggctgacaagcccgagaag
gtgacgaaggctcgcgccaagaaggccgaagacaagctcgccgacctcgtgggcagcgcg
cgccccgtgcccagcggacgccgcccgggccgtcccgccaagaacgccaacaatgatgcc
gacggcttcgacgattcgatggacggcgagggcgaagtcctgcccgatctgaagccgccc
aagcgcggcggcaagcgcggcaaggccgatcccaaggatctgatcgcccgcggccccgtc
acgcccgaagaatacgaagcgcgccgcaaccgcctgaagcagctgatcaagctgggcaag
gaccgcggctacctgacctacggcgaaatcaacgaccatctgcctgacgacctggtcgac
gcggaagcgatcgacggcatcatcagcacgttcagcgacatgggcattgcggtctacgac
caggcgcccgacgccgaaacgctgctgatgagcgaaaacgcgccggtggcctccaacgac
gacgacgttgaagacgaagccgaagccgcgctgaccaccgtggactccgatttcggccgc
accaccgatcccgtgcgcatgtacatgcgtgaaatgggctcggtggaactgctgacgcgc
gaaggcgaaattgaaatcgccaagcgcatcgaagacggcctgaagcacatggtcatggcc
atctcggcctgcccgaccacgatcaacgagatcctggcccatatcctgcgcgtgcgcgaa
ggccaggcccagatcgacgaagtggtcgacggcctggtcgatccggaagacggcgaagag
tacgccggcgccggcgtcaccgccgaggaagacgaaggcgacgacggccccgcgggcggc
atgtccagcaagcagctggaagacctgcgcgtgaaggccctggcgaagttcgacgaagtc
ggcaagcagttcgaaaaaatgcgccactcgtacgagaaggacggctacaagtcggacgtc
tacgtgcgcgcccaggaatccatccagaacgaactgatgggcatccgcttcacggccaag
atggtcgagaaactggcggatacgctgcgccagcaggtcgaggaagtgcgccagctcgag
cgcgccgtcctgcacacgtgtgtggaccgtgccggcatgccgcgcacgcacttcatcaag
gtgttcccgggcaacgaaaccaacatgcagtgggtcgtcgatgaagtggctgccggccac
ccgtacgccgaaacgctggagcgccagattcccgccgtgcaggaactgcagcagaagctc
atcgacctgcaaacgcgcgtcgtgctgccgctgaaggacctgaaggacgtcaacaagcgc
atggccactggcgaagccaaggcccgcaaggccaagcgcgaaatgaccgaggccaacctg
cgcctggtgatctcgatcgccaagaagtatacgaaccgcggcctgcagttcctggacctg
atccaggaaggcaacatcggcctgatgaaggccgtggacaagttcgaataccgccgcggc
tacaagttctcgacctacgcgacctggtggatccgtcaggccatcacgcgttccatcgcc
gaccaggcgcgcaccatccgtatcccggttcacatgatcgaaacgatcaacaagatgaac
cggatcagccgccagatcctgcaggaaaccggcgccgagccggatcccgcgaccctggcg
cagaagatggacatgcccgaggacaagatccgcaagatcctgaagatcgccaaggaaccg
atctccatggaaacgcccatcggtgacgacgacgactcgcacctgggtgatttcatcgaa
gacacgtccaccctggcgccttccgacgcggccttgcacggttctatgcgcgatgtggtc
aaggaagtgctagactctctcaccccgcgtgaagccaaggttctgcgcatgcgtttcggc
atcgaaatgagcacggaccagaccctggaagaagtgggcaagcaattcgacgtcacgcgc
gagcgcattcgccaaatagaggcgaaagcactgcgcaagctgcgtcaccccagccgggcc
gataagctgaagagcttcctggaagggcagtaa
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