Achromobacter xylosoxidans A8: AXYL_03254
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Entry
AXYL_03254 CDS
T01341
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
axy
Achromobacter xylosoxidans A8
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
axy03032
]
AXYL_03254
03400 DNA repair and recombination proteins [BR:
axy03400
]
AXYL_03254
Enzymes [BR:
axy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AXYL_03254
DNA replication proteins [BR:
axy03032
]
Prokaryotic type
DNA Topoisomerases
AXYL_03254
DNA repair and recombination proteins [BR:
axy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXYL_03254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ADP16574
UniProt:
E3HGS4
LinkDB
All DBs
Position
3506498..3507568
Genome browser
AA seq
356 aa
AA seq
DB search
MNSSSQAPRRSGGAALVYYDDSRAGYTRARINGHAFHYLDARGKRIRSAREIKRIDALAI
PPAYEQVWICPSPLGHLQATGRDARGRKQYRYHPDWTAVRDASKYQSLADFAQTLPRIRR
QVERDLRTPGLSQNKVIAVLVRLLEATLVRIGAREYARANKSYGLTTLKRRHASVSGDRF
RFRFQGKSGVSHDVSAADRRVARVIKRCLDIPGQQLFQYLDEDGGSHPVDSGAVNAYLRA
AGRGDFTAKHYRTWAGSVMAYAALQSCPADDAAQAQKNVVEVVKQVARRLANTPAVCRAC
YVHPAILAAYLEGALPPAAAAPQAPRGLHPDERRLLAFLRAQAAAAAPAAQESKDR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaagctcccaagcgccccgcaggtccggcggcgcggcactggtctattacgac
gacagccgggcaggctatacgcgagcccgcatcaacggccacgccttccactacctggac
gcgcgcggcaagcggatacgcagtgcgcgggagatcaagcgcatcgatgccctggcgata
cctccggcctatgagcaggtatggatctgcccgtctccgcttgggcacctgcaggccacc
gggcgcgacgcgcgcggccgcaagcagtaccgctaccacccggactggaccgcggtgcgc
gacgcgagcaagtaccaaagccttgcagattttgcgcagacgctgccgcgcatccggcgc
caggtcgaacgtgatctgcgcacccccggcttatcccagaacaaggtgatagccgtactg
gtgcggctgctggaggcaaccctggtgcgcatcggcgcgcgcgaatacgcccgggccaac
aagtcctatggcctgaccaccctcaagcgccgccacgccagcgtcagcggcgaccgcttc
cgtttccgcttccagggcaagagcggcgtaagccacgacgtcagcgccgcggaccggcgc
gtggcgcgcgtcatcaagcgctgcctggacatccccggccagcagcttttccagtacctg
gacgaggatggcggcagccatccggtggactctggcgcggtcaatgcctatctgcgcgcg
gcgggccggggcgacttcacggcgaagcactaccggacctgggcaggttccgtcatggcc
tacgcggcgttgcagagctgtcccgccgacgacgccgcccaggcgcagaagaacgtggtg
gaagtggtcaaacaggtggcgcggcggctcgccaatacgcctgccgtgtgccgggcctgc
tatgtgcacccagccattctggccgcctatctggagggcgcgttgccaccagccgcggcc
gcgccacaagcgccccgcggcctgcacccggacgaacgccgcctgctggcctttttgcgg
gcgcaggccgctgcggcggcgccggccgctcaggaatcaaaggatcgatga
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