Achromobacter xylosoxidans A8: AXYL_03681
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Entry
AXYL_03681 CDS
T01341
Name
(GenBank) helicase c2 2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
axy
Achromobacter xylosoxidans A8
Pathway
axy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AXYL_03681
09124 Replication and repair
03420 Nucleotide excision repair
AXYL_03681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axy03021
]
AXYL_03681
03036 Chromosome and associated proteins [BR:
axy03036
]
AXYL_03681
03400 DNA repair and recombination proteins [BR:
axy03400
]
AXYL_03681
Enzymes [BR:
axy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AXYL_03681
Transcription machinery [BR:
axy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AXYL_03681
Chromosome and associated proteins [BR:
axy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AXYL_03681
DNA repair and recombination proteins [BR:
axy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AXYL_03681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
Spectrin
Motif
Other DBs
NCBI-ProteinID:
ADP17001
UniProt:
E3HMC3
LinkDB
All DBs
Position
complement(3956683..3958953)
Genome browser
AA seq
756 aa
AA seq
DB search
MSYAVAVRALCEFTARTGDLDLRFTPAPTGLEGMAGHATVTGRRGPAYETEVALSGQHET
LLVRGRADGYDPAANQLEEIKTYRGQLDSVRDNHRAVHWAQAKVYGHLLCQARGLGSLRV
ALVYFNVVTEEETVLAETHEAAALEAFFREQCGRFLAWATTELAHRQSRDAALEALKFPH
GEFRAGQRELAVAAYRTARDGGCLMAQAPTGIGKTLGTIFPLLKASPGAGLDKIFFLAAK
SPGRGLALEALDTVNAQPAAPGLRVLDLQARDKTCVHPDLACHGESCPLAQGFYDRLPQA
REAALAHARLDAATVAAAAREHQVCPYYLSQELIRWSDVVVGDYNYYYDATAMLYAMTQV
YQWKVAVLVDEAHNLVDRARRMYTGELDQASLAAARYAAPKALKKSLDGLQRSWNALNKK
QAERYQAYDEVAAGVLAAVQKAVGAIMEYMAESPLPQDDPVLAFYFEALQFMRLAEQFGS
HALFDVTRSEASAAGAKTPPSVLCVRNVIPAPYLAARYAAAHATVLFSGTLSPQQFYRDT
LGLPAATPWLDVAAPFQAEQLAVRVVGNVSTRYRDRERSLEPIVELIARQYAERPGNYLG
FLSSFDYLRQVSDLMRERHPAVPIWLQTPGMDEAGRAAFLARFTEAGQGVGFAVLGGAFS
EGVDLPGKRLIGAFIATLGLPQVNAVNENMKRAMDQRYGVENGYDYTYLYPGMQKVVQAA
GRVIRTEHDVGTVHLIDDRYRRAKVRGLLPGWWRVD
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgcggtggcggtgcgcgcgctgtgcgaatttacggcgcggacaggggacctg
gacctgcgcttcacgcccgcgcccacgggcctggagggcatggcgggccacgcgaccgtg
acgggccgccgcgggccggcgtacgagaccgaagtggccctgtccgggcagcatgaaacc
ctgctggtgcgcggccgcgccgatggctacgaccccgcggccaaccagctcgaagagatc
aagacctaccgcggccagctggacagcgtgcgcgacaaccaccgcgccgtgcattgggca
caggccaaggtatacggacatctgctgtgccaggcgcgcggactcggtagcctgcgcgtg
gcgctggtgtatttcaacgtggtcaccgaggaagagacggtgctggcggaaacgcacgag
gccgccgcgctggaagcgttttttcgcgagcaatgcggacgtttcctggcctgggcgacg
accgaactggcgcaccgccaatcacgcgatgcggcgctggaggcgctgaagtttccgcac
ggcgaattccgcgccgggcagcgcgagctggccgtggctgcctaccgcacggcacgcgac
ggcggctgtctgatggcccaggcgcccaccggcataggcaagacactgggcacgatcttc
ccgctgctcaaggccagcccgggcgcgggcctggacaagatcttcttcctggcggccaag
agcccggggcgcggcctggcgctggaagcgctggacaccgtcaacgcgcagcccgccgcg
cctggcctgcgggtgctggacctgcaggcgcgcgacaagacctgcgtgcatccggacctg
gcctgccacggcgaatcctgcccgctggcccagggcttctacgaccgcttgccgcaggcg
cgcgaggccgcgctggcgcatgcgcgcctggatgccgccacggtagcggccgccgcgcgc
gagcaccaggtctgcccgtactacctgtcgcaggagctgatccgctggagcgacgtggtg
gtgggcgactacaactactactacgacgccacggcaatgctgtacgccatgacgcaggtc
taccaatggaaggtggcggtgctggtggacgaggcccacaacctggtcgaccgggcgcgt
cgcatgtacacgggcgagctcgaccaggcctcgctggcggccgcgcgctacgccgcgccc
aaggcgctgaagaaatccctggacggactgcaacgctcctggaatgcgctcaacaagaag
caggcggaacgctatcaggcttatgacgaggtggcggccggggtgctggccgcggtgcag
aaggcggtgggcgcgatcatggaatacatggccgaatcgccgttgccgcaggacgatccg
gtgctggcgttctacttcgaggccttgcagttcatgcggctggcggaacagttcggctcg
cacgcgttgttcgatgtgacccggtcggaggcaagcgccgccggcgccaagacaccgcct
tctgtgctgtgcgtgcgcaacgtgatcccggcgccgtatctggcggcgcgctacgcggcg
gcgcacgctaccgtgctgttttccggcacgctgagcccgcagcagttctaccgtgacacg
ctgggcctgcccgcggccacgccctggctcgacgtggccgcgccgttccaggccgagcaa
ttggcggtgcgcgtggtgggcaacgtgtccacgcgctatcgcgaccgcgaacgctcgctg
gaacccatcgtcgagctgattgcgcggcaatacgcggagcggccagggaactacctgggc
tttctcagtagcttcgactatctgcgccaggtgtcggatctgatgcgcgagcgccacccc
gccgtgccgatctggctgcagaccccaggcatggacgaggccggccgcgccgctttcctg
gcgcgctttacagaagccgggcagggcgtgggcttcgcggtgctgggcggcgctttctcg
gaaggggtggacttgcccggcaagcgtttgatcggcgccttcatcgccacgctgggactg
ccgcaggtaaatgccgtgaacgaaaacatgaagcgcgccatggaccagcgctatggcgtg
gagaacggctacgactacacctacctgtatcccggcatgcagaaagtggtgcaggccgcg
ggccgcgtcatccgcaccgagcacgacgtgggcacggtgcacctgatcgacgaccgctat
cgccgcgccaaggtgcgcggcctgctgccaggttggtggcgggtggactga
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