Achromobacter xylosoxidans A8: AXYL_04076
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Entry
AXYL_04076 CDS
T01341
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
axy
Achromobacter xylosoxidans A8
Pathway
axy03420
Nucleotide excision repair
axy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXYL_04076 (uvrD)
03430 Mismatch repair
AXYL_04076 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
axy03400
]
AXYL_04076 (uvrD)
Enzymes [BR:
axy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXYL_04076 (uvrD)
DNA repair and recombination proteins [BR:
axy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXYL_04076 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AXYL_04076 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
T7SS_EccA1_N
Motif
Other DBs
NCBI-ProteinID:
ADP17395
UniProt:
E3HTV5
LinkDB
All DBs
Position
complement(4353998..4356292)
Genome browser
AA seq
764 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTN
KAAREMLARMSAILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQSFQILDVTDQLAAIK
RLMKANGVDDEKYPPRDVQRFINGAKEEGLRPADVEAYDAHRRRLIEIYQLYEAQCLREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMADFERDYARGTVIRLEQNYRSFGHILDSANALIGHNTGRLG
KNLWTEQGDGEPVRVIEQPSDGMEAQWIVDEIRSLIREGSLRREIAVLYRSNAQSRVLEH
AIFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPHDDTSWMRVVNFPTRGIGARTLEQ
LGDAARAHDTSLYAAVALVPGKGGSNLAQFAQLIHRLIEETRDLPLPEMVEHMLEASGLN
AHYKAEREGAERLENLNELITAAAVFASEENYDGMPAGVVPEQDTASTLNAGVVDAPIVA
SDGLTPLAAFLSHAALEAGDNQAQQGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SVLEASGLEEERRLMYVAITRARQRLYISLAQSRMLHGQTRYAMRSRFLDEIPEQHLKWL
SPKAGLAQVGGTGAGWGGGNRGDAFGRKPTNTIAPRQPRGVATGVTVGDKQYRVGQGVHH
ARFGDGTIVSLSGAGQDAQAEIQFRDVGAKTLALGIAKLDIVQG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagagaagctcaatcctgaacaacgcgccgcagtaacgttagaaccgcagcac
gccctggtcttggccggggcgggcagcggcaagacccgggtgctcaccacccgcatggcc
tggctgattcaaaccggccaggcctcgccttttgggctgctggcggtcacgttcaccaac
aaggcggcgcgcgagatgctcgcgcgcatgtcggccatcctgccgatcgatacgcgcggc
ctgtggatcggtaccttccacggtctgtgcaaccgcatgctgcgcgcgcatcaccgcgat
gccggcctgccgcagagcttccagatcctggacgtcaccgaccagctcgcggcgatcaag
cggctgatgaaggccaacggcgtcgacgacgaaaagtatcctccccgcgatgtgcagcgc
ttcatcaacggcgccaaggaagagggcctgcgtcccgccgacgtcgaagcctacgacgcc
catcgccgccgcctgatcgagatctaccaactctacgaggcccagtgcctgcgcgagggc
gtggtggacttcgccgagctgctgctgcgcgcctacgaactgctgtcgcgcaacgcgccc
gtgcgcgagcactaccagcgccgtttccgccacatcctggtcgacgagttccaggacacc
aacacgctgcaatacaagtggctgcgtctgttggccggcggtggcgccgcgatcttcgcg
gtgggcgacgacgaccagtccatctacgcgttccgcggcgccaacgtcggcaacatggcc
gacttcgagcgcgattacgcgcgcggcaccgtgatccgcctggagcagaactaccgttcc
tttggccacatcctggattcggccaacgcgctgatcggtcacaacaccggccggctgggc
aagaatctctggaccgagcagggcgacggcgagccggtgcgcgtcatcgagcagccgtcc
gacggcatggaagcgcagtggatcgtggacgagatccgctccctgatccgcgaaggcagc
ctgcgccgcgagatcgccgtgctctaccgcagcaacgcgcagtcgcgcgtgctggaacac
gccatcttttccgccggcattccctacaaggtctacggcggcctgcgctttttcgagcgc
caggaaatcaagcacgcgctggcctacctgcgcctgatggccaacccgcacgacgatacc
tcctggatgcgggtcgtcaactttcccacgcgcggcatcggcgcgcgcacgctggagcaa
ttgggcgacgccgcgcgcgcgcacgacaccagcctgtacgcggccgtggctctggtgccg
ggcaagggcggttccaacttggcgcagttcgcgcagctgatccatcgcctgatcgaagag
acccgcgacctgccgctgccggaaatggtcgagcacatgctcgaggccagcggcctgaac
gcgcactacaaggccgaacgcgaaggcgcggaacgtctggaaaacttgaatgaactgatc
acggccgcggccgtgttcgcgtccgaggaaaactacgacggcatgcccgctggcgtggtg
cccgaacaggacacggcctccacgctcaatgcgggcgtggtggacgcgcccattgtggcg
tccgacggcctgacgccgctggcggcgttcctgtcgcatgcggcgctggaagccggcgac
aaccaggcccaacagggccaggacgccgtgcaactcatgaccgtgcacgcggccaagggc
ctggagtttgacgccgtgttcatcaccggcctggaagaggggctgttcccgcacgagaac
agcgtcctggaagcttccggactggaagaagagcgccgcctcatgtacgtggccattacg
cgcgcgcgccagcgcctgtacatcagcctggcacaaagccggatgctgcatggccagacg
cgctacgcgatgcgttctcgcttcctggacgaaattccggaacagcacctgaagtggctg
tcgcccaaggccggtctggcccaggtcggcggcacgggcgcgggctggggtggcggcaat
cgtggcgacgctttcggacgcaagcccaccaataccattgcgccgcgtcaaccgcgtggc
gtcgctaccggtgtcacggtgggcgacaagcagtatcgtgtggggcagggcgtgcatcac
gcgcggttcggcgatggcacgatcgtgagcctgagcggagcagggcaggacgcccaggct
gaaatccagttccgcgacgtgggcgccaagaccttggcgctgggcatcgccaaactcgat
attgttcagggttga
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