Achromobacter xylosoxidans A8: AXYL_06421
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Entry
AXYL_06421 CDS
T01341
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
axy
Achromobacter xylosoxidans A8
Pathway
axy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
axy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXYL_06421 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axy03021
]
AXYL_06421 (rpoA)
03400 DNA repair and recombination proteins [BR:
axy03400
]
AXYL_06421 (rpoA)
Enzymes [BR:
axy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXYL_06421 (rpoA)
Transcription machinery [BR:
axy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXYL_06421 (rpoA)
DNA repair and recombination proteins [BR:
axy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXYL_06421 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AAA_lid_4
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ADP19714
UniProt:
E3HSX0
LinkDB
All DBs
Position
complement(6906405..6907391)
Genome browser
AA seq
328 aa
AA seq
DB search
MSTQGFLKPRSIEVEPVGTHHAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQMT
GVVHEYSTIPGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKTGAGTVLASDIELPHDVE
IINPGHAICNLTDAGKLEMQIKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASFSPVRRV
SYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGAGDSYEA
PVRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcaaggtttcctgaagccgcgctccattgaagtcgaaccggtcggcacgcac
catgccaagatcgtgatggagccgttcgagcgtggctacggtcacacgctgggcaacgcc
ctgcgccgcatcctgctgtcttcgatgaccggctacgcgccgaccgaagtccagatgacg
ggcgtggtgcacgaatactcgaccatcccgggcgttcgcgaagatgtcgtcgacatcctg
ctgaacctgaagggcgtggtcttcaagctgcacaaccgcgacgaagtgaccctggtcctg
cgcaagactggcgcgggcaccgtgctggccagcgacatcgagctgccgcacgacgtcgag
atcatcaaccccggccatgccatctgcaacctgacggacgcaggcaagctggaaatgcag
atcaaggtcgaaaagggccgcggctacgtgccgggcaacgtgcgcgcgctgtcggaagac
cgcacccacaccatcggccgcatcgttctggacgcctcgttcagcccggtccgccgcgtc
agctacgccgttgaaagcgcccgcgtggaacagcgtaccgacctggacaagctggtcctg
gacatcgaaaccaacggcgtgatctcgcccgaggaagcggtgcgccagtcggcccgcatc
ctgatggaccagatctcggtcttcgccgccctggaaggcgcaggcgattcgtacgaagcc
ccggtccgcggcacgccgcagatcgatccggtgctgctgcgcccggtcgacgacctggaa
ctgaccgtgcgttcggccaactgcttgaaggccgaaaacatctactacatcggcgacctg
atccagcgtaccgaaaacgagctgctcaagaccccgaacctgggtcgcaagtcgctcaac
gagatcaaggaagtcctggccgcacgcggcctgacgctgggcatgaagctcgaaaactgg
cccccgctgggcctggagcgtccctaa
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