Ilumatobacter coccineus: YM304_03480
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Entry
YM304_03480 CDS
T02501
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aym
Ilumatobacter coccineus
Brite
KEGG Orthology (KO) [BR:
aym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aym03032
]
YM304_03480 (topA)
03400 DNA repair and recombination proteins [BR:
aym03400
]
YM304_03480 (topA)
Enzymes [BR:
aym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
YM304_03480 (topA)
DNA replication proteins [BR:
aym03032
]
Prokaryotic type
DNA Topoisomerases
YM304_03480 (topA)
DNA repair and recombination proteins [BR:
aym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YM304_03480 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAN00662
UniProt:
A0A6C7E2I1
LinkDB
All DBs
Position
complement(385185..387980)
Genome browser
AA seq
931 aa
AA seq
DB search
MSKPLVVVESPAKAKTLSKFLGSDYDVRASVGHVADLPSKGLNIDTENGFKPTYELTERG
KTVVKELKAALKDASELYLATDEDREGEAISWHLLEYLKPKVPVKRMVFHEITKAAIDHA
VDNPRGIDYGMVDAAETRRILDRLYGYEVSPVLWRRVNRGLSAGRVQSPTVRLIVERERE
RIAYITADYWDIDVVTATDPEFDAKLHAVAGARVAGGKDFDNRGNVSDKVTALDEARATG
LAESLAESDFTVKSVEDKPYKSSPKAPFMTSTLQQEGGRKLRLSSSQVMRVAQGLYERGF
ITYMRTDDVILSDEAMAATRDAVTKEYGSKYLNAAPKQYKKKSKGQDAHEAIRPTTPYRS
PDAVSAELNSQELSLYRLIWQRTLASQMADATGVTVSVRLTAPATDRTTGEIVECEFSAS
GTTITFPGYRAVYVASKEERGDDAADKEALLPELKVGDIVPVASVTPNGHTTTPPARFTE
ASLVKRLEELEIGRPSTWASIIQTVQDRGYVWKKGQALVPTWTAFAVIRLLEEHFDALVD
YDFTASTENDLDAISRGERQKDQWLTRFYFGQTDDHDVPAITAEAGSADDALLGLKRLVE
ENLDHIDAAEINTFPLGNDENGELIVVKPGRYGPYVKRGEDTAGLPDNLPPDELTVAKAI
ELLAAPKGDEPIGELDGLPVYAKNGRYGPYVQWGDHDNPPPGLEKPKMSSLFSNMTLEEI
TLEQAEKLISLPRHLGDDPEDGTPIYANNGRYGPYVQKEKDYRNIDSEDQIFEITLEQAL
KIYSEPKVYKRGNRNMAAKGPLKEFGTDPVSEKNVTAKDGRFGVYVTDGETNASLGKGDR
LEEITPERAFELLAIRREAIIAKGGTPGKKAKATKKKAAAKKKAAAKKSAAKKKAAKKKA
PAKKKAAAKKSAAKKSTAGGDDGVVVVDLND
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagccactcgtcgtcgtcgagtcgcctgccaaggcgaaaaccctctcgaagttt
ctcggcagtgactacgacgtgcgcgcctcggtggggcacgtggccgacctgccgtcgaag
ggtctgaacatcgacaccgagaacggcttcaagcccacctacgagctcaccgaacgcggc
aagaccgtcgtcaaagaactcaaagcggcgctcaaagacgcttcggagctctatctcgca
accgatgaagaccgcgagggggaggccatctcgtggcacctgctcgagtacctgaagccg
aaggtcccggtgaagcggatggtgttccacgagatcaccaaagccgcgatcgaccacgcc
gtcgacaacccgcgcggcatcgactacggcatggtcgacgccgccgagacccgccgcatc
ctcgaccgcctgtacgggtacgaggtgtcgccggtgctgtggcgtcgcgtcaaccgcggc
ctctcggccggccgcgtgcagagcccgaccgtccgactcatcgtcgaacgcgagcgcgag
cgcatcgcctacatcaccgccgactactgggacatcgacgtcgtcaccgcgaccgacccc
gagttcgacgcgaagctccacgccgtcgccggagcgcgagtcgcgggcggcaaagacttc
gacaatcgcggcaacgtcagcgacaaggtcaccgcgctcgacgaagctcgtgcgaccggc
ctggccgagagcctcgccgagtccgacttcaccgtgaagtcggtcgaagacaagccgtac
aagtcgtcgccgaaggccccgttcatgacctcgacgctgcaacaggaaggcggccgcaaa
ctgcgtctgtcgtcgtcgcaggtgatgcgtgtcgctcagggcctgtacgagcgtgggttc
atcacctacatgcgtaccgacgacgtcatcctctccgacgaagccatggcggcgacgcgt
gacgcggtcaccaaggagtacggatcgaagtacctcaacgccgcgccgaagcagtacaag
aagaagtcgaagggccaagacgctcacgaagcgatccgcccgaccacgccgtaccgctcg
cccgacgccgtgtcggccgagctcaacagccaggaactctcgctctaccgcctcatctgg
cagcgcaccctcgcgtcgcagatggccgacgccaccggcgtcacggtcagcgtccggctc
accgcccccgccaccgaccgcaccaccggcgagatcgtcgagtgcgagttctcggcatcg
ggcaccacgatcacgttccccggctaccgcgccgtgtacgtggcgtcgaaggaagagcgc
ggcgacgacgcagccgacaaggaagcgctgcttcccgaactcaaggtcggcgacatcgtc
cccgtcgcctcggtcacacccaacggccacacgaccacaccgcccgcccggttcaccgaa
gcctcgctggtgaagcggctcgaagaactcgagatcggccgcccgtccacctgggcctcg
atcatccagacggtgcaagaccgtggctacgtgtggaagaagggccaagcgctcgttccg
acctggaccgcgttcgccgtcatccgcctgctcgaggagcacttcgacgcgctcgtcgac
tacgacttcaccgcgtcgaccgagaacgacctcgacgccatctcgcgaggcgagcggcag
aaagatcagtggctcacgcggttctacttcggccagaccgacgaccacgatgttccggcg
atcacggccgaagcgggttcggccgacgacgcgctgctcggcctcaagcgcctggtcgaa
gagaacctcgaccacatcgacgccgccgagatcaacacgttcccgctcggcaacgacgag
aacggcgaactcatcgtcgtcaagccgggccgctacggcccctatgtcaagcgcggcgaa
gacaccgccggcctgcccgacaacctcccgcccgacgagctcacggtcgccaaggccatc
gaactgttggccgcacccaagggcgacgagccgatcggcgaactcgacggcctgcccgtc
tacgcgaagaacggccgctacggcccgtacgtccagtggggcgaccacgacaacccgcct
cccgggctcgagaagccgaagatgtcgagtctcttcagcaacatgacgctcgaagagatc
acgctcgagcaggccgagaagctcatctcgctgccgcgccacctcggcgacgacccggag
gacggcacacccatctacgcgaacaacggccgctacggaccgtacgtgcagaaggaaaag
gactaccgcaacatcgactccgaagaccagatcttcgagatcacgctcgaacaggcgctc
aagatctacagcgagcccaaggtgtacaagcggggcaaccgcaacatggccgcgaagggc
ccgctgaaggagttcggcaccgacccggtcagcgagaagaacgtcaccgccaaggacgga
cgattcggcgtgtacgtcaccgacggcgagaccaacgcgtcgctcggcaagggcgaccgt
ctcgaggagatcactcccgagcgtgccttcgaactgctcgcgatccggcgtgaggcgatc
atcgccaagggcggcaccccgggcaagaaggccaaggccacgaagaagaaggcagctgcc
aagaagaaggctgcggccaagaagtccgccgccaagaagaaggctgcgaagaagaaggcc
ccggcgaagaagaaggcggcagcgaagaagtccgccgccaagaaatcgactgccggaggc
gacgacggggtcgttgtcgtcgacctcaacgactga
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