Ilumatobacter coccineus: YM304_09780
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Entry
YM304_09780 CDS
T02501
Name
(GenBank) putative cell surface protein
Organism
aym
Ilumatobacter coccineus
Pathway
aym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YM304_09780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HYR
Big_13
Big_3_3
Motif
Other DBs
NCBI-ProteinID:
BAN01292
UniProt:
A0A6C7E539
LinkDB
All DBs
Position
1090115..1093852
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AA seq
1245 aa
AA seq
DB search
MKRLSRRSRVLAPALALLAAVGGLAIAPDRPVAALTSAENLPVSVNVSRTNQSSAGDRTL
HDAPISFAQFDDSANTLNSATLSWNLSITGERSGGSRGTLRLSYGGDLAAEALTYDTPQK
TFTLVGSAPVTSGHLGTGTFSPSNLLIRYTGISGTFPWGVEAAVTGTVTMTYDYTAGVAD
TTPPVVTVPSNVVAEQTSMAGAVVTYSGQTFTDNVGVTSSGCTPASGSTFGPGPTTVTCT
ASDAAGNTASDTFTVLVQDTTDPVVGIIVSSPVEATGPGGAPVPFWVSVADDSATASLDS
CSPASGETFPIGSTTISCTASDASSNTGGDTATVVVQDTTDPTVVVPSNIVSEATGPSGA
TVSYPAATYSDAVGVVSSGCSPASNTSFSIGANTVTCSATDNAGNTGSDSFLITVEDTTD
PVVVAPSNMVREATSSAGAVVTYPAATYSDAVGVVSSGCSPTSGSTFSIGVNTVVCNAAD
AAGNTGTDTFTITVSDTTPPVASVIVSSPVEATGSSGATVTYTVDATDDDSIDSVVCNPP
SGSTFGIGTTTINCTVTDPSSNSTSASGSVTVVDTTAPTIAVPADFGVEQQSAAGSVVTY
SATFTDAVGVTSSSCVPASGSAFGPGATTVTCEAEDAAGNDASDSFVVTVSDSVAPAIVV
PSDFGVEQESAAGSVVTYSATFTDAVGVTSSSCVPASGSAFGPGATTVTCEAEDAAGNDA
SDSFVVTVSDSVAPTIVVPSDFEVEQDSAAGSVVTYSATFADAVGVTSSSCAPASGLTFS
PGPTLVTCVAEDAAGNDANDSFVVTVRDTTAPAASIVVDDTFEATGPSGATVTYTVDATD
VDGIDSVVCTPLSGSVFPIGSTAIDCTITDASSNETRAMATVTVEDTTEPTVTVPTDVVA
EAAGPDGAVADYSGQSFVDVVGVESSGCTPASGTTFAIGATTVTCSASDAAGNTGSATFT
VTVSDTTAPTATTPDDVVAEAAGPDGATVAFAVPADDAVGVDAIVCDHEPGSTFAVGTTE
VTCSVADAAGNSTAVSFSITIVDTTPPAVVDAPTIVAEATGLDGAPVTFDLDVSDVVGVA
TVECDPPSGSTMGIGTHAVTCTITDAAGNSTSTTFDVTVADTTAPAVPSDAPELSQSFVL
PAGAQSGVINYELPDIVEAAGAVEVACTPASGSTFGVGVHDIECTATDGAGNSTPFTIEM
VVAGASGGPSLPATGRGVHPWLLLGAFAIALGTFLSGSSRRVRRS
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactgtcacgacgctcgcgagtgctcgctccggcactcgcacttctcgccgcg
gtgggcggactcgccatcgctccggaccgacctgtcgccgccctgacgtcggccgagaac
ctcccggtgtcggtcaacgtctcgcgaaccaaccagtcgagcgcgggcgaccggaccctc
cacgatgcaccgatctcgttcgcccagttcgacgactcggccaacacgctcaacagcgcc
accctgtcgtggaacctgagcatcaccggcgagcgaagcggcggatcgaggggcaccctc
aggctctcgtacggcggcgacctcgcggccgaggccctgacctacgacacaccgcagaag
acgttcaccctcgtcgggagtgccccggtcacatcgggtcacctcggcaccgggacgttc
tcgccgagcaacctcctcatcaggtacaccggcatcagcggaaccttcccctggggcgtc
gaggcagccgtcaccggcacggtcacgatgacctacgactacaccgccggggtcgccgac
accacgccgccggtcgtcaccgttccgtccaacgtggtcgccgagcagacgagtatggcc
ggggccgtcgtgacctacagcggccagacgttcaccgacaacgtgggggtgacctcgtcg
ggttgcacgccggcatccggttcgacattcgggcccggcccgacgacggtcacctgcacc
gcctccgacgccgccgggaacacggcgagcgacacgttcaccgtcctcgtccaggacacc
accgacccggtggtggggatcatcgtctcctcgcccgtcgaggcgaccggtccgggcgga
gcgccggtcccgttctgggtgtcggtcgccgacgattcggcaacagcatcgttggactcg
tgttcgccggcctccggggagacgttcccgatcggctcgaccacgatctcgtgcacggcg
agcgacgcctcgtccaacaccggcggcgacacggcgaccgtggtcgttcaagacacgacc
gacccgaccgtcgtcgtgccgagcaacatcgtttccgaagcgaccggtccgtcgggtgcc
accgtctcgtaccccgctgcgacctacagcgatgcggtcggcgtggtcagctccggttgt
agcccggcgagcaacacgtccttctcgatcggcgccaacacggtgacctgctccgccacc
gacaacgcgggcaacaccggttccgacagcttcctcatcacggtggaggacacgaccgac
ccggtcgtcgtggcgccgagcaacatggttcgcgaagcgacgagttcggcaggcgcggtg
gtcacgtatcccgctgccacgtacagcgacgcggtcggcgtggtgagctcggggtgcagc
ccgacatcgggatccaccttctcgatcggtgtgaacaccgtcgtgtgcaacgcggccgac
gccgccggcaacacgggaaccgacacgttcaccatcacggtgagcgacaccacgccgccc
gtcgcctcggtgatcgtgagctcgccggtcgaagccaccggctcatccggagccacggtg
acctacaccgtcgacgccaccgatgacgacagcatcgactcggtcgtgtgcaacccgccg
tcgggctcgacgttcggtatcggcacgaccacgatcaactgcacggtcaccgatccgtcg
tcgaactcgacgtcggcgagcggctccgtcaccgtggtcgacacgaccgctccgacgatc
gccgttcctgccgacttcggcgtggagcagcaatctgccgcgggttcggtggtgacgtac
agcgcgacgttcaccgatgcggtcggcgtgacgagttcgtcgtgtgtgccggcgtcgggg
tcggcgttcgggcctggagcgacgacggtgacgtgtgaggccgaggatgctgcgggcaac
gatgcgagtgattcattcgtcgtcaccgtctccgattcggtcgcccctgcgatcgtggtg
ccgagcgatttcggtgtggagcaggaatctgctgctggttcggtggtgacgtacagcgcg
acgttcaccgatgcggtcggcgtgacgagttcgtcgtgtgtgccggcgtcggggtcggcg
ttcgggcctggagcgacgacggtgacgtgtgaggccgaggatgctgcgggcaacgatgcg
agtgattcattcgtcgtcacggtctcggactcggtcgctccgacgatcgtggtgccgagt
gacttcgaggtggagcaggactcggccgccggttcggtggtgacgtacagcgcgacgttc
gccgatgcggtcggcgtgacgagctcgagctgtgctccggcatcgggtttgacgttttct
cctggcccgaccctcgtgacgtgcgtggccgaggatgccgcgggcaacgacgccaacgac
tcgttcgtcgtgaccgtccgtgacacgaccgctccggctgcgtcgatcgtcgtcgacgac
acgttcgaggccaccggcccgagcggtgcgacggtgacctacaccgtcgacgccaccgat
gtcgacgggatcgactcggtcgtgtgcactcccttgtcgggcagtgtgttcccgatcggt
tccaccgccatcgactgcaccatcaccgacgcatcgtcgaacgagaccagggccatggcg
accgtgacggtcgaagacaccaccgagccgaccgtgaccgtcccgaccgacgtggtggcc
gaggcggcaggccccgacggggctgtcgccgactacagcggacagagcttcgtcgacgtc
gtcggcgtcgagtcgtcggggtgcaccccggcttcggggacgacgttcgcgatcggtgcg
accacggtgacgtgcagtgcctccgatgccgcgggcaacaccggatcggcaacgttcacc
gtcacggtgagcgacaccaccgctccgactgcgaccactcccgatgacgtggtggccgag
gcggcgggcccagacggcgcgaccgtcgcgttcgccgtgccggccgacgatgccgtcggc
gtcgatgccatcgtctgcgaccacgagccggggtcgacgttcgccgtgggcaccaccgag
gtgacctgctcggtcgctgacgcggcgggcaacagcaccgccgtgagcttctcgatcacg
atcgtcgacaccacgccgccggctgtcgtcgacgcgccgacgatcgtcgccgaagcgacc
ggcctcgacggggcgccggtcaccttcgacctcgacgtctccgacgtcgtcggtgtggcg
acggtggagtgcgatccgccttcgggttcgaccatgggcatcggcacacacgcggtgacc
tgcacgatcaccgatgcggccggcaactcgacgtcgacgaccttcgacgtcaccgtggcc
gacacgaccgctccggccgtcccgtcggacgcgcctgaactgagccagtcgttcgtgttg
ccggcgggtgcgcagagtggcgtgatcaactacgaactgcccgacatcgtggaggcagcg
ggcgccgtcgaggtggcctgcaccccggcgtcggggagcacgttcggcgtcggtgtgcac
gacatcgagtgcacggcgaccgatggtgccggcaactcgacgccgttcacgatcgagatg
gtcgtcgccggtgcgtccggcggtccgtcgctcccggccacgggtcgcggggtccacccg
tggctgctcctcggagcattcgccatcgccctcggcacgttcctctcggggtcgagccgg
cgggtccgccgcagctga
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