Ilumatobacter coccineus: YM304_10550
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Entry
YM304_10550 CDS
T02501
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
aym
Ilumatobacter coccineus
Pathway
aym00260
Glycine, serine and threonine metabolism
aym00460
Cyanoamino acid metabolism
aym00630
Glyoxylate and dicarboxylate metabolism
aym00670
One carbon pool by folate
aym00680
Methane metabolism
aym01100
Metabolic pathways
aym01110
Biosynthesis of secondary metabolites
aym01120
Microbial metabolism in diverse environments
aym01200
Carbon metabolism
aym01230
Biosynthesis of amino acids
aym01240
Biosynthesis of cofactors
aym04981
Folate transport and metabolism
Module
aym_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
aym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YM304_10550 (glyA)
09102 Energy metabolism
00680 Methane metabolism
YM304_10550 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YM304_10550 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
YM304_10550 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
YM304_10550 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
YM304_10550 (glyA)
Enzymes [BR:
aym01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
YM304_10550 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAN01369
UniProt:
A0A6C7E842
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All DBs
Position
1185762..1187003
Genome browser
AA seq
413 aa
AA seq
DB search
MPFPTTTNPDTEVSELIEREIERQTTGLQLIASENFTSPAVMAATGSVLTNKYSEGYPGK
RYYGGNQIVDSIEQLAIDRVKELFGAEHANVQPHSGANANMCVYQALLEPGDTILGLSLD
HGGHLTHGSPVNASGLLYNFVAYGTGAEDRIDMDNVRELALEHRPKMIVAGTTSYPRRLD
PEPFKKIADEVGALLMFDIAHLAGLVAGGAHPNPVPYADIVTFTTHKTLRGPRGGCILSK
QEHQKAIDKAVFPGWQGGPLEHAIAGKAIAFREAMDPSFKEYAAQIVANASALASALADE
GFRLVSGGTDNHMMVVDLTPFDAELTGKVAQATLDEAGITLNKNTIPDDPRSPFVTSGVR
IGTPSVTTQGMTEAEMPVIAKLIATALRERENPEAIAQVRTEVADLCSKFPAY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccccacgacgacgaaccccgacaccgaggtgtcggagctgatcgaacgcgaa
atcgagcgccagaccaccggactccagctcatcgccagcgagaacttcacctcgccggcc
gtcatggccgccacgggttcggtgctgaccaacaagtactccgagggctaccccggcaag
cggtactacggcggcaaccagatcgtcgactcgatcgaacagctcgcgatcgatcgcgtg
aaagaactcttcggagccgaacacgcgaacgtgcagccgcactccggcgccaacgcgaac
atgtgcgtgtaccaagcgctgctcgagccgggcgacaccatcctcgggctcagcctcgac
cacggcggtcacctcacgcacggctcgccggtcaacgccagcgggctgctctacaacttc
gtggcctacggcaccggcgccgaggatcgcatcgacatggacaacgtccgtgaactcgcg
ctcgagcaccgacccaagatgatcgtcgccgggaccacctcctacccgcgtcgcctcgat
cccgagccgttcaagaagatcgccgacgaagtgggcgcactgctcatgttcgacatcgcc
cacctggccggactcgtcgccggcggcgctcatcccaacccggtgccgtacgccgacatc
gtcaccttcaccacgcacaagacgctgcgcggcccgcgcggcggttgcatcctctccaag
caggaacaccagaaggccatcgacaaggccgtgttccccggctggcagggcggaccgctc
gagcacgccatcgccggcaaggccatcgccttccgtgaggccatggacccgtcgttcaag
gagtacgccgcgcagatcgtcgccaacgcatcggcgctggcatcggcgctcgccgacgag
ggcttccgtctcgtctcgggcggcaccgacaaccacatgatggtcgtcgacctcaccccg
ttcgatgccgagctgaccggcaaagtcgcacaggccaccctcgacgaggccgggatcacg
ctcaacaagaacacgattcccgacgacccgcgcagcccgttcgtcacgagcggcgtccgc
atcggcacgccgtcggtcacgacgcagggcatgaccgaggccgagatgccggtcatcgcc
aagctcatcgccacggcgctccgcgaacgcgagaaccccgaggcgatcgcgcaggtgcgc
accgaggtcgccgacctctgctcgaagttcccggcctactga
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