Ilumatobacter coccineus: YM304_16080
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Entry
YM304_16080 CDS
T02501
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aym
Ilumatobacter coccineus
Pathway
aym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YM304_16080 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aym03019
]
YM304_16080 (pnp)
03016 Transfer RNA biogenesis [BR:
aym03016
]
YM304_16080 (pnp)
Enzymes [BR:
aym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
YM304_16080 (pnp)
Messenger RNA biogenesis [BR:
aym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
YM304_16080 (pnp)
Transfer RNA biogenesis [BR:
aym03016
]
Prokaryotic type
tRNA degradation factors
YM304_16080 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BAN01922
UniProt:
A0A6C7E779
LinkDB
All DBs
Position
1808358..1810832
Genome browser
AA seq
824 aa
AA seq
DB search
MAEAISVSGPISGTDKTLTFETGKFAPQSQGAVVASIAGTKVLTTANAAKSVRDGMDFFP
LTVDVEERAYAAGKIPGSFFRREGRPTEDAILTCRLTDRPLRPSFPEGFRHETQVVTTVL
GADQVNPHDVLSINAASAALMISGIPFDGPLGTVRMAYSQEGEWIPHPTFEEAENGTFEI
VIAGRELDDGDVAVMMVEAGGSENAFYYYEDGAKKVTEEVLGDALQACKVWIKESIALQR
QLVASVIATHGPIEPMSWTPVLDYTPEIMDAVEKFSTEAMKPAVTISAKAERNAAVDAVA
ADAVAHFCGDDGEFPGQSKMVKEAVRSLMKKVMRRRVLDEGIRIDGRAPGDLREVTAEVG
VLPTAHGSGLFQRGETQVMNVLTLAMPRMNQMIDSLNPNNEKRYLHHYNMPPWANGETGR
VGSPKRREIGHGALAARAVLPVIPNQEDFAYTLRLVSEVMASNGSTSMGSVCASSLSLMD
AGVPVKSHVSGIAMGLIHEDGKYVTLTDILGAEDAMGDMDFKVAGTEDAITALQLDTKID
GIPADVLSDALAQARVARLTILDVMNAAIPESRSEVADTAPKITTIYIPLDKVGEVIGPK
GKVINTIQQETGADIGVDDDGARGIVTIGAVEAWRMEEAKMAILNIVDPPKAELDKVYMG
RVVNITKFGAFVNILPGRDGLVHISKMGGGRRINSVDDVLELGQEIEVKVDEIDDKGKVS
LTPTSPLGGDGGDAGSSSDGGGNSGGGRERRSRNDRNDRGDRGDKRSDSGSSSTTTSDVV
EVSFEDSFDAELADELGDLGPKSDRPKGDRDGGNRGGGSRRRHR
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccatttccgtgtccggacccatctctgggaccgacaagacactcaccttc
gagacgggcaagttcgccccccagtcgcagggtgccgtcgtggcatccatcgctgggacg
aaggttctcaccactgccaacgccgcgaagagcgtgcgcgacggcatggacttcttcccc
ctgacggtcgacgtcgaggagcgggcgtacgccgccggcaagatccccggctcgttcttc
cgtcgtgaaggccgcccgaccgaggacgcgatcctcacgtgccgcctcaccgaccgtccg
ctccgcccgagcttcccagagggcttccgccacgagacgcaggtcgtcaccaccgtgctg
ggcgccgaccaggtcaacccgcacgacgtgctctcgatcaacgctgcctcggcggcgctc
atgatctcgggtatcccgttcgacggcccgctcggcaccgtccgcatggcctacagccaa
gagggcgaatggatcccgcaccccacgttcgaagaagccgagaacggcaccttcgagatc
gtcatcgccggccgtgaactcgacgacggtgacgtcgccgtgatgatggtcgaagccggt
ggctccgagaacgccttctactactacgaagacggcgccaagaaggtcaccgaagaagtg
ctcggcgacgccctccaggcctgcaaggtgtggatcaaggaatcgatcgcgctccagcgt
cagctggtcgcatcggtcatcgccacccacggcccgatcgagccgatgtcgtggaccccg
gtcctcgactacacccccgagatcatggacgccgtggagaagttctcgaccgaggccatg
aagcctgccgtcacgatctcggccaaggccgagcgcaacgcagcggtcgacgcggtcgcc
gccgacgccgtcgcccacttctgtggcgacgatggcgagttccccggccagagcaagatg
gtcaaggaagccgttcgcagcctcatgaagaaggtcatgcgtcgtcgtgtcctcgacgaa
ggcatccgcatcgacggccgtgcgcccggcgatctccgcgaagtcaccgccgaagtcggc
gtgctccccaccgctcatggctccggcctgttccagcgtggtgagacgcaggtcatgaac
gtgctgacgctggccatgccccgcatgaaccagatgatcgactcgttgaaccccaacaac
gagaagcgttacctgcaccactacaacatgccgccgtgggccaacggcgaaaccggccgt
gtcggttcgcccaagcgccgcgagatcggccacggtgcgctcgccgcccgtgccgtcctg
cccgtcatcccgaaccaggaagacttcgcgtacacgctgcgcctcgtctccgaggtcatg
gcctccaacggctcgacctcgatgggttcggtctgcgcctccagcctctcgctgatggac
gccggcgtgccggtcaagagccacgtgtcgggtatcgccatgggcctcatccacgaagac
ggcaagtacgtcacgctcaccgacatcctcggtgccgaggacgccatgggtgacatggac
ttcaaggtcgccggcaccgaagacgccatcacggcgttgcagctcgacaccaagatcgac
ggcattcctgccgacgtgctgtccgacgcgctcgctcaggctcgcgtcgctcgcctgacg
atcctcgacgtgatgaacgccgccattccggagtcccgctccgaggtggccgacaccgcg
ccgaagatcacgacgatctacatcccgctcgacaaggtcggcgaggtcatcggcccgaag
ggcaaggtcatcaacacgatccagcaggagaccggagccgacatcggcgtcgacgacgac
ggcgctcgcggcatcgtcaccatcggtgcggtcgaggcgtggcgtatggaggaagccaag
atggcgatcctcaacatcgtcgatccgccgaaggccgagctcgacaaggtctacatgggc
cgtgtcgtcaacatcaccaagttcggtgcgttcgtcaacatcctcccgggtcgtgacggt
ctcgtccacatctcgaagatgggtggcggacgtcgcatcaacagcgtcgatgacgtgctc
gaactcggtcaggagatcgaagtcaaggtcgacgagatcgacgacaagggcaaggtcagc
ctcaccccgacgagccccctcggtggcgacggcggcgacgccggctcctcgtccgacggt
ggcggcaactcgggtggcggccgtgagcgtcgcagccgcaacgaccgcaacgatcgtggt
gaccgcggcgacaagcgcagcgactcgggctcgtcgagcacgacgacctccgacgtcgtc
gaagtcagcttcgaagacagcttcgacgccgaactcgccgacgagctcggcgacctcggc
ccgaagagcgatcgtccgaagggcgaccgcgacggtggcaaccgaggcggcggaagccgt
cgtcgtcaccgctga
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