Ilumatobacter coccineus: YM304_18670
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Entry
YM304_18670 CDS
T02501
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aym
Ilumatobacter coccineus
Pathway
aym03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aym00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YM304_18670 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aym03019
]
YM304_18670 (rnc)
03009 Ribosome biogenesis [BR:
aym03009
]
YM304_18670 (rnc)
03036 Chromosome and associated proteins [BR:
aym03036
]
YM304_18670 (rnc)
Enzymes [BR:
aym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
YM304_18670 (rnc)
Messenger RNA biogenesis [BR:
aym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YM304_18670 (rnc)
Ribosome biogenesis [BR:
aym03009
]
Eukaryotic type
90S particles
RNase
YM304_18670 (rnc)
Prokaryotic type
rRNA processing factors
YM304_18670 (rnc)
Chromosome and associated proteins [BR:
aym03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
YM304_18670 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BAN02181
UniProt:
A0A6C7E6R7
LinkDB
All DBs
Position
2072748..2073488
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AA seq
246 aa
AA seq
DB search
MSSTDTPGTSAASPDTAPGADHASLAAAVGHEFGDPSLLQRALAHRSWCSEHPGTESNER
LEFLGDAVLGWAIADIAYRRFDDLPEGQLTDLRKSVVNATALASIAEEIGVGPHLLLGKG
EGAAGGAEKPSILSDAFEAILGAVYLDGGSEAAYAMVERHVAPRLARNIDRLVELDNKTQ
LQELCAKRGDEPPRYELTSVGPDHAKVFTARALVGSRLVGTGDGRSKKAAEQVAAAAACA
ALLADA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagcaccgacaccccaggcacctcggcggcttcccccgacacggcccccggagcc
gatcatgcgtcgctcgccgctgcggtggggcacgagttcggtgacccgtcgttgttgcaa
cgcgcgctagcgcatcgctcgtggtgttccgagcatcccggtaccgagagcaacgagcgc
ctcgagttcctcggtgacgccgtgctcgggtgggcgatcgccgacatcgcgtatcgacgc
ttcgacgaccttcccgaagggcaactcaccgacctccgcaagagtgtcgtcaacgccacg
gcgctcgcatcgatcgcggaagagatcggtgtcggcccccatctcctgttgggcaaaggc
gaaggcgctgcgggtggtgccgagaagccgtccatcctgtccgacgcgttcgaagcgatc
ctcggtgcggtctacctcgacggtggcagcgaggcggcgtacgccatggtcgaacgccac
gtcgcaccacgactcgctcgcaacatcgaccgactcgtcgaactcgacaacaagacgcaa
ctccaggagttgtgcgcgaagcggggcgacgagccgccgcgctacgagttgacctcggtc
ggtcccgaccacgccaaggtcttcaccgcccgggcactcgtcggatcacggctcgtcgga
accggcgacgggcgatcgaagaaggcggccgagcaggtggcggctgccgcggcctgtgcg
gccctgctcgccgatgcctga
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