Ilumatobacter coccineus: YM304_21380
Help
Entry
YM304_21380 CDS
T02501
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aym
Ilumatobacter coccineus
Pathway
aym03030
DNA replication
aym03410
Base excision repair
aym03420
Nucleotide excision repair
aym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YM304_21380 (polA)
03410 Base excision repair
YM304_21380 (polA)
03420 Nucleotide excision repair
YM304_21380 (polA)
03440 Homologous recombination
YM304_21380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aym03032
]
YM304_21380 (polA)
03400 DNA repair and recombination proteins [BR:
aym03400
]
YM304_21380 (polA)
Enzymes [BR:
aym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YM304_21380 (polA)
DNA replication proteins [BR:
aym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
YM304_21380 (polA)
DNA repair and recombination proteins [BR:
aym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
YM304_21380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YM304_21380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_P_Exo
HHH_2
NYN_YacP
HHH
Motif
Other DBs
NCBI-ProteinID:
BAN02452
UniProt:
A0A6C7E8V4
LinkDB
All DBs
Position
2365158..2367827
Genome browser
AA seq
889 aa
AA seq
DB search
MGTHLLVDGNSLTYRAFFALPTDMATASGQVTNAVFGFTSMLAYVLNEQQPEGILVAFDR
PEPTFRHEAEPEYKAQRDAAPDILRQQMGLVREVLEALGIQTIDKPGWEADDLIATSVDE
LVARGHDVIIVTGDRDSYQLVNDASKVRVMYNKRGVSDYALYDEEGIEGKTGVRPEMYVQ
YAALRGDNSDNLPGVPGVGEKTAAKLINKYGGLDGIFEHVDEQTPKLRQNLTENEERARK
NLELMLLRHDAPVDDVDFDDLVPKPNGEEMKRLFDFLEFRALSGRIAGAINAMGAPVDLG
PEVEQQELVAEVTEIESAADAAAAITAVPALDVAARWVGEPGRSELSGLAIVTDAESAEV
AWIPGGFLADPAVDAALAAHTDVRGHQIKPLMRSLLDLDCSLDGIALDTAIAAYLIDPAE
ARYELPDLIEKYTDFARPSDDAAGSGQLDLDGTSMSDADLAGRDALAVHHLVEPIRASLD
AQGMAELYTTIENPLVMVLAKMEHIGIAVDIEELEGLNKKLTDEVESLVAELREVADMPD
LNLNSPKQLRELLYDVKGLTPIKKTKTGPSTDASTLEKLEHEWPEFLAPLRRHREVEKLR
GTYGKGLLAEVAADGRIHATFNQTVARTGRLSSDKPNLHNIPVRSEEGRLFRRAFVASEG
TELLVADYNQIELRCIAHLAQDPGLLDAFNSGQDIHNATAARVFGVEPGDVTLDQRSKAK
MVSYGLAYGMEAYGLAQRLNIPVDEAAPILDAYFVAFPNVKAYMDRTVEEARERGYTETL
FGRRRPIPELMNSNFRVRQAGERQAMNAGIQGLAADIFKVALVRIDQALVDAKSELILQV
HDEVLVEVPPDEKESIGDLVIELMHDAAELDVPLEVNVSWGHTWAAAKG
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgggcacccatcttctcgtcgacggcaactcgttgacctaccgggcgttctttgcgctg
ccgaccgacatggcgaccgcgagcggtcaggtcaccaacgccgtgttcggcttcacgtcg
atgctggcgtacgtgctgaacgagcaacaacccgaaggcatcctcgtcgcgttcgaccgt
cccgagccgacgttccggcacgaggccgaacccgagtacaaggcgcagcgcgacgccgcc
cccgacatcctccgtcagcagatggggctcgttcgtgaggtgctcgaagcgctcggcatc
cagacgatcgacaagcccggttgggaagccgacgacctgatcgccacgagcgtcgacgaa
ctcgtcgcgcgtggccacgacgtcatcatcgtcacgggcgaccgcgacagctaccaactg
gtgaacgacgccagcaaggtgcgcgtcatgtacaacaagcgcggcgtgagcgactacgcc
ctctacgacgaagagggcatcgaaggcaagaccggtgtccgccccgagatgtacgtccag
tacgcggccctccgtggcgacaactccgacaaccttccgggcgtgccaggagtgggggag
aagacggcggcgaagctgatcaacaagtacggcggcctcgacggcatcttcgagcacgtc
gacgagcagacgccgaagctgcgtcagaacctcaccgagaacgaggagcgcgcccgcaag
aacctcgagctcatgttgctccgccacgacgcgccggtcgacgacgtcgatttcgacgat
ctcgttccgaagccgaacggtgaggagatgaagcgtctgttcgacttcctcgagttccgt
gcgctgagcggccggatcgccggagccatcaacgcgatgggcgccccggtcgatctcggg
ccagaggtcgagcagcaggagttggtcgccgaggtgaccgagatcgagtcggctgccgac
gctgcagcagcgatcaccgcggtgccggcgctcgacgtcgccgcacgttgggtgggcgag
ccgggccgttcggagctgagcgggctggcgatcgtcaccgacgccgagtcggccgaggtc
gcctggatccccggcggcttcctcgccgacccggcggtcgacgcggcgctggccgcacac
accgacgttcgcggtcatcagatcaagccgctcatgcggtcgctgctcgacctcgactgc
tccctcgacggcatcgcgctcgacacggcgatcgccgcgtacctgatcgatccggccgaa
gcgaggtacgagcttcccgacctcatcgagaagtacaccgatttcgcccgcccgagcgac
gatgcggcgggaagcggtcaactcgacctcgacggcacctcgatgtccgatgccgacctg
gccgggcgggacgcactcgccgtccaccacctcgtcgagccgatccgggcgagcctcgac
gcgcagggcatggccgagctgtacacgacgatcgagaacccgctcgtgatggtgctcgcc
aagatggagcacatcggcatcgccgtcgacatcgaggaactcgaagggctcaacaagaag
ctgaccgacgaggtcgagtcgctcgtcgccgagctccgcgaggtcgccgacatgcccgac
ctcaacctcaactcaccgaagcagctccgcgagttgctctacgacgtcaaggggttgacg
ccgatcaagaagacgaagacggggccgtcgaccgatgcgtcgacgctcgagaagctcgag
cacgagtggcccgagttcctcgctccgctccgtcgtcatcgcgaagtcgagaagctgcgt
ggcacgtacggcaaggggctgctcgctgaggtggccgccgatggtcgcatccacgcgacg
ttcaaccagaccgtcgcccggaccggacgactgtcgtccgacaagccgaacctccacaac
attccggttcggtccgaggaaggtcgcctgttccggcgggccttcgtcgcgtcggaaggc
accgaactgctcgtggccgactacaaccagatcgagctgcgctgcatcgctcatctcgcg
caggaccccggtctgctcgatgcgttcaacagcggccaagacatccacaacgcgacggcg
gcacgcgtgttcggcgtagagcccggcgacgtcacgctcgaccagcgttcgaaggcgaag
atggtgtcgtacggcctggcctacggcatggaggcctacgggttggcacagcgcctcaac
attccggtcgacgaagccgcgccgattctcgacgcctacttcgtcgcgtttccgaacgtg
aaggcgtacatggatcgcacggtcgaggaggcgcgcgagcgcggctacaccgagacgctg
ttcggtcgtcgccgtccgattcccgagctgatgaactcgaacttccgggttcgccaggcg
ggggagcggcaggcgatgaacgccggcatccagggcttggccgccgacatcttcaaggtg
gcgctcgtccgcatcgaccaggcgctcgtcgacgcgaagagcgagctgatcctccaggtg
cacgacgaggtgctcgtcgaggtgccgcccgacgagaaggagtcgatcggcgatctcgtc
atcgagttgatgcacgacgcggccgagctcgacgtgccgctcgaagtcaacgtgtcgtgg
ggccacacgtgggcagcggcgaagggctga
DBGET
integrated database retrieval system
