Ilumatobacter coccineus: YM304_26920
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Entry
YM304_26920 CDS
T02501
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aym
Ilumatobacter coccineus
Pathway
aym03420
Nucleotide excision repair
aym03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YM304_26920
03430 Mismatch repair
YM304_26920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aym03400
]
YM304_26920
Enzymes [BR:
aym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YM304_26920
DNA repair and recombination proteins [BR:
aym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YM304_26920
MMR (mismatch excision repair)
Other MMR factors
YM304_26920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
HRDC
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_25
HHH
Motif
Other DBs
NCBI-ProteinID:
BAN03006
UniProt:
A0A6C7EG81
LinkDB
All DBs
Position
complement(2989659..2991836)
Genome browser
AA seq
725 aa
AA seq
DB search
MAVIHATAIDHASFDVPITNTCAADLAPDQLAAVTHPGGAARIIAPAGSGKTRVLTERAR
HVLTNWRLPATAVSLVAFNKRAQEEMRERTPDLPSLHVRTLNAIALAIVNGSAPFAPQSR
RWRTIDEPDVRRIIGDLVSFPRRRNSDPVAPWIEALSLVRLGLVSPSDAEARYDGDVDGF
AAFWPSYRATLDKRGVVDFDDQIYRALMILLSDPVARRAAQRACRMMLVDEFQDLTPAHL
LLIRLLAAPGGAVFGVGDDDQTIYGYNGADPGWLIDFAELFPGAGAHPLEVNYRCPAGVV
DLADRLLRHNRRRVDKTIRAHSTDNGGWSIADSVDPVTASADAVRGALASGAAPAEVAVL
ARVNAVLAPVQVALVGEGIPISGGVGLEFMDRTSVRAVLAWLRLATAAERGRFLPDDLKE
ALRRPSRSFHPRINDWIAEQGSVVDLFNLAGRLNNERDADRLMEFAADIQKMQQEAKRGV
PTSDLVFTLIDEIGLAGSVAGLDASRRGMNRSAQGDDLTAIQHLAALHDDTATFEQWLRG
RLAAKRSTDGVVLSTVHRVKGQEWPHVVVHHVDAEQYPHRLADDVEEERRLFHVAITRAS
RHATIVTGPKPSPFVEELTTEPSPDRVISSHRPEPAPKSAPSKSKANPVDDLDPVAAARF
EQLRALRTTLAAGKPAYVVFDNKTLAAIARSAPRSKQELARISGVGPAKLDKYGDDFVAL
LETLD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtcatccatgccactgcgatcgaccacgcttcgttcgacgttccgatcaccaac
acgtgtgctgccgacctggcgcccgatcaactcgcagcggtgacgcacccgggtggtgca
gcacgcatcatcgccccggcgggctccggcaagacgcgggtgctcaccgagcgggcccgt
cacgtgctcaccaactggcgtctcccggcaaccgccgtgagcctcgtcgcgttcaacaag
cgtgcccaggaggagatgcgcgagcggacccccgaccttccgagcctgcacgtgcgcaca
ctcaacgccatcgcgctcgccatcgtcaacggcagcgcgccgttcgccccgcagtctcgt
cgctggcgcaccatcgacgagcccgacgtccggcggatcatcggcgatctcgtgtcgttc
ccgcggcggcgcaacagcgacccggtcgcgccgtggatcgaagcgctcagcctcgtccgg
ctcggtctggtgtcgccgagcgacgccgaagctcgctacgacggtgacgtcgacgggttc
gccgccttctggccgtcgtaccgagccacgctcgacaagcgcggtgtggtcgacttcgac
gaccagatctatcgcgccctcatgatcctgttgtccgacccggtcgctcgccgcgccgct
cagcgcgcctgccggatgatgctggtcgacgagttccaagacctcacgccggcgcacctc
ctgctgatccgtctgctcgccgctcccgggggagcggtgttcggtgtcggcgacgacgac
cagacgatctacggctacaacggtgccgaccccgggtggctcatcgacttcgccgaactg
ttccccggtgccggtgcccacccgctcgaggtcaactaccgctgcccggccggtgtcgtc
gacctcgccgaccggttgctgcggcacaaccgacgccgagtcgacaagaccattcgagcg
cactcgaccgacaacggtgggtggagcatcgccgattcggtcgaccccgtcacggcgtcg
gccgacgcggtgcgcggcgcgctcgcctccggcgcggcacccgccgaggtcgcggtgttg
gcgcgggtcaacgccgtgctggcgccggtccaggtggcgctcgtcggcgaaggcattccg
atctcgggcggcgtcggcctcgagttcatggaccgcacgtcggtgagagccgtgctcgcc
tggctgcggctcgcaacggcggcggagcggggcaggttcctccccgacgacctcaaggag
gcgctgcgtcgcccgtcgcgttcgttccatccacggatcaacgactggatcgccgagcag
ggcagcgtggtcgatctgttcaatctggccggtcgtctgaacaacgaacgcgacgccgac
cgcctgatggagttcgcggccgacatccagaagatgcagcaggaagcgaaacgaggtgtg
ccgacctccgacctcgtcttcaccctcatcgacgagatcgggctcgccggctcggtcgcc
ggtctcgacgccagtcggcgcggcatgaaccgctcggcgcagggcgacgacctcacggcc
atccagcacctcgcggcgttgcacgacgacaccgcgacgttcgaacagtggcttcgtggc
cgcctcgcggcaaagcgctcgaccgacggtgtcgtgctgtcgaccgtccaccgggtcaag
gggcaggagtggccgcacgtcgtcgtccatcacgtcgacgcggagcagtatccgcatcgc
ctcgccgacgacgtggaggaggagcgccgcctgttccacgtggcgatcacccgagcgagc
cgccacgccaccatcgtcaccggaccgaagccgagcccgttcgtcgaagaactcaccacc
gaaccgtcacccgaccgggtcatctcgtcgcaccgaccggagccggcgcccaagtctgca
ccgtcgaagagcaaggcgaatcccgtcgacgatctcgacccggtggctgcggctcggttc
gagcagcttcgtgcactccgcaccacgctcgcggccggcaagccggcgtacgtggtgttc
gacaacaagaccttggccgcgatcgctcgttcggcacccaggtcgaagcaagagctcgcc
cgcatctcgggcgtcggcccggccaagctcgacaagtacggcgacgacttcgtcgccctg
ctcgagacgctcgactga
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integrated database retrieval system
