KEGG   Ilumatobacter coccineus: YM304_37600
Entry
YM304_37600       CDS       T02501                                 
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
aym  Ilumatobacter coccineus
Brite
KEGG Orthology (KO) [BR:aym00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aym03021]
    YM304_37600 (sigF)
Transcription machinery [BR:aym03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     YM304_37600 (sigF)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_Crp_2 DUF134 HTH_23 HTH_3 Sigma70_ECF MarR LacI HTH_37 HTH_24 KORA HTH_AsnC-type HNF-1_N DUF7343 Ead_Ea22 HTH_IclR MarR_2 HTH_38 HTH_26 HTH_31 Ribosomal_L29 Phage_antitermQ
Other DBs
NCBI-ProteinID: BAN04074
UniProt: A0A6C7E8T9
LinkDB
Position
complement(4258286..4259038)
AA seq 250 aa
MSEDLEDLGLFREYAATRSRSTRNELVQRHMGLATHVAARYARTARHDEDLRQVAMVGLI
KAVDRFDPEYGAAFSLYAGRTIEGELKRHFRDKTWTVKVPRSAKELHLLVRNATTELEQR
DGRSPSVGRLAEYLEIDRDDVVRGLEATAAARVDTIDVVGTGGDDAPATDRQMALATDDR
SFADRENDMVVAELLERLPEREQEIVRLRFYENMSQTEIADRVGVSQMQVSRLLRQSFER
MRSWMTERSA
NT seq 753 nt   +upstreamnt  +downstreamnt
atgtccgaagatctcgaagacctcgggctgtttcgtgagtacgcggccacgcggtctcgc
tcgactcgcaacgagttggttcagcgacacatgggtctcgccacccacgtcgcggcacgg
tatgcacgaacagcgcgccatgacgaagacctgcgtcaggtggcgatggtcggtctcatc
aaagcggtcgaccggttcgaccccgagtacggagcggcgttctcgctgtacgccggccga
accatcgaaggcgagttgaagcgccacttccgcgacaagacgtggacggtcaaggtgccg
cggagtgccaaggaactgcacctcctggtgcgcaacgcgacgaccgaactcgaacagcgt
gacggtcgatcgcccagcgtcggccgactcgccgagtacctcgagatcgatcgcgacgac
gtcgtgcgcgggctcgaagccacggccgcagcccgtgtcgacacgatcgacgtcgtcggc
accggcggtgacgacgcgccggcaaccgatcggcagatggcgctcgccaccgacgatcgc
tcgttcgccgaccgcgagaacgacatggtggtcgctgaactgctcgagcgactgcccgaa
cgcgagcaggagatcgttcgtttgcgtttctacgagaacatgtcgcagaccgagatcgcc
gatcgagtgggtgtgtcgcagatgcaggtcagccggctgctccgtcaatcgttcgagcgg
atgcgctcgtggatgaccgagcggtccgcatag

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