Acinetobacter yuyunsongii: ABLB98_08185
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Entry
ABLB98_08185 CDS
T11564
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ayu Acinetobacter yuyunsongii
Pathway
ayu03030
DNA replication
ayu03430
Mismatch repair
ayu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ayu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABLB98_08185 (dnaE)
03430 Mismatch repair
ABLB98_08185 (dnaE)
03440 Homologous recombination
ABLB98_08185 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ayu03032
]
ABLB98_08185 (dnaE)
03400 DNA repair and recombination proteins [BR:
ayu03400
]
ABLB98_08185 (dnaE)
Enzymes [BR:
ayu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABLB98_08185 (dnaE)
DNA replication proteins [BR:
ayu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABLB98_08185 (dnaE)
DNA repair and recombination proteins [BR:
ayu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABLB98_08185 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
XDO81719
LinkDB
All DBs
Position
1701249..1704812
Genome browser
AA seq
1187 aa
AA seq
DB search
MRFVHLGIHTEFSITESIVRIPDLVKAAVKDDMPALALTDLSNLHAAVKFYEACLKKGIK
PILGSVIRLNDPEHRATLLAMSSKGWRNLTEIVSRGFIEGQQLSIPCVQKEWILEQSEDL
IVLLGQHSDVGKMLCSSNPQKAEPLLEAWIEKFGNRVYLALTRTERVGEEDFIQQAVKLA
AKYQIGVVAHNDVHFVEQDDFEAHEARVCIADGYVLGDDKRPKNYSSEQYFKTGEQMSEL
FSDIPSAIENTYHIAKRCNVTLQLGTYFLPDFPIPDGYTIDTYFEHLSRTGLEERLNHLY
PIAERDEDWAEIRKPYDDRIKYEVDIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIEYVAQKYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGVDLVTAIDMEPQLKDI
VTNPSNPDNDDAAEIWEMALKLEGITRNTGKHAGGVVIAPGKITDYSAVLCEADGTSRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAVQNINKRIKSEIPLEIANVPLDDKDAYLVFA
DANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQFCAGYTLGGADLLRRAMGKKKPEEMVKQRQIFIE
GAAKKEIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPSEFMAAVLSS
EMQNTDSIVFLIDDCRNNKLEVLPPSVNMSLYHFHASDEKTIVYGLGAIKGVGEQAMQSV
IDSRINEGPYKDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERSSLMAQLPEAVQAA
EQARSNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRPE
LKSFIPAKLNELTPTRRGVTTVFAGLVVDIANFPNRIMITLDDGTARVEISCNHERFQRY
KEIVRLEQVIVIEGEIYEREGFDRPMARLSKAFNLNEIRQKRAQSIQIRLPQDLMTKSLA
KDLQAILLPYCNVDMCQHIALQIQLEQSFATAELHLGPQWKVAPLDELLGKLRDYFGKDA
IFIEYQVKSKAAKVAEAPKVTTVAPPPENMSMDEALDLYQAEISQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttgttcatctcggtatccatacagaattttcgattacggaatcgattgttcgc
atacctgatttggtcaaagctgccgttaaagatgacatgcctgcgcttgcattaactgac
ttatccaacttgcacgctgcggtgaaattttatgaagcttgtttaaaaaaaggcattaaa
cctattttaggcagtgtcattcgactaaatgacccagagcaccgcgcaaccttattagct
atgagcagtaaaggttggcgaaatctaaccgaaatcgtatctcggggctttattgaagga
caacaacttagtatcccatgcgtacaaaaagaatggatacttgaacaatcagaagattta
attgtattgcttggacagcatagtgatgttggcaaaatgctttgttcatccaatccacaa
aaagcagaacctttgttagaagcatggattgaaaagtttggtaatcgtgtttatttagct
ttaacacgtactgaacgtgttggtgaagaagattttattcaacaagccgttaaactcgct
gctaaatatcaaattggtgtcgttgcacataatgatgttcactttgttgaacaagatgat
tttgaagcacatgaagcacgtgtgtgtattgccgatggttatgtccttggtgacgataaa
cgtcctaagaattatagctctgaacagtactttaaaactggtgagcaaatgtctgagcta
ttttcagacatccctagtgccattgaaaatacctaccatattgccaaacgttgtaatgtt
accttacaactcgggacttatttcttacctgatttcccgatcccagatggctataccatc
gacacttatttcgaacatttatctcgtacaggtttagaggaacgcttaaatcacctttac
cctattgctgaacgtgatgaagattgggctgaaattcgtaaaccttatgatgatcgtatc
aagtacgaagttgatattattttaaaaatgggttttccgggttacttcctgatcgtcatg
gactttattcaatgggccaaaaataatggtgtgcctgtaggtcctggccgtggttcgggt
gctggttcattagttgcctacagtttaaaaattactgatctagatccattacgttatgat
ttgcttttcgaacgtttcttaaaccctgaacgtgtctcaatgcccgattttgacgtcgat
ttctgtattgcaggtcgtgaccgagtaatcgaatatgtcgcacaaaaatacggtcgtgaa
gccgtttcacagattgcgacttttggtacgatggctgcaaaaggcgcaatccgagatgtt
gcacgtgtcttaggtaagtcttatggtctggctgaccgtatttccaaaatgattccgacc
aagccgcttggcgttgatctagtcactgcgattgacatggaaccacagctcaaagacatc
gtgaccaacccatcaaaccctgataatgatgatgctgctgaaatttgggaaatggcactt
aagctcgaaggcattacacgaaacacagggaaacacgcaggtggtgtagtcattgcaccc
ggaaaaattaccgattattcagcggtactgtgtgaagcagatggaacaagtcgtgttgcg
caatacgataaagatgatgttgaagcagcaggtctggttaaatttgacttcttaggtttg
cgtaacctcacagttattgaagatgcggttcaaaatattaataaaagaatcaaatctgaa
attcctctcgaaattgcaaatgttccattagatgacaaggatgcttatttagtctttgcg
gacgcaaatacaactgcggtgttccagtttgaatccgtcggcatgaaaaaaatgctcaag
gaagcaagaccgagtaaatttgaagaaattattgctttcgtttctttataccgccccggt
ccaatggatctaattccagactttatccatcgtatgcatggtggtgagttcgaatatcta
catccattgctagaaggcgtacttgaacctacctacgggataatggtttaccaagaacag
gtgatgcaggcagcacagttctgcgcaggctatacacttggtggtgcagatttacttcgc
cgtgccatgggtaaaaagaaacctgaagaaatggttaaacagcgccaaatctttattgaa
ggtgctgcaaaaaaagagattgatgaagcgacagcaaaccatatcttcgactatatggaa
aagttcgcaggttatggatttaacaaatcacatgccgcagcctatgcccttgttgcctat
cacactgcatggttaaaagcacattatccttcagaatttatggcggcggttttatcatca
gaaatgcagaatacggacagtatcgtattcttaattgatgactgccgtaataataaatta
gaagtgctaccgccttccgtaaatatgtctttgtatcatttccacgccagtgatgagaaa
accattgtttatggtctcggtgcaattaaaggcgtcggtgaacaagcgatgcaatcggtc
atcgactcacgcatcaatgaaggtccatacaaggatttattcgatttctgtcatcgtatt
gacctaaaaaagatcaataaacgtaccttagaagccttaattcgtgcaggtgcgttggat
tgtttaggcattgaacgctcaagcttaatggctcaattgcctgaagctgttcaagcggcg
gaacaagcacgaagtaaccgtgagacgggtatcatggatttatttggtgaagttgaagaa
gttcaacgcaaacctgctaaacctgtgaaaccgtggtcagacgaagttcgccttaaaggt
gaaaaagatacgcttggattgtatctcactggtcatccgattgatgtctatcgtccagaa
ttaaaatcgtttattccagcaaaattaaatgaactaacacctactcgtcgtggtgtcacg
accgtctttgctggtttagtcgttgatattgccaacttcccgaaccgtatcatgattaca
ctagatgatggtactgctcgtgtggaaatcagctgtaatcatgagcgttttcaacgttat
aaagaaatcgttcgtctagaacaagtcattgttatcgaaggcgaaatctacgaacgtgaa
ggctttgatcgcccaatggcgcgtttaagtaaagcgtttaatttaaatgaaatccgccaa
aagcgtgcccaaagtattcaaattcgtctccctcaagatttaatgaccaaatctttagcc
aaagatttacaggcaattttattaccttattgcaatgtcgatatgtgtcagcatattgct
ttacaaatccaacttgaacaaagctttgcgacagcagagttgcatctaggtccgcaatgg
aaagtcgcacctttagatgaattgctaggcaagctacgtgattattttggtaaggacgcg
atttttattgaatatcaagtgaagtcaaaagctgcaaaagtagcagaagcgcctaaagta
acgacagttgcaccaccacctgaaaacatgtctatggatgaagcgcttgatctgtatcaa
gctgaaatctctcaatactcttaa
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