KEGG   Acinetobacter yuyunsongii: ABLB98_11490
Entry
ABLB98_11490      CDS       T11564                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ayu  Acinetobacter yuyunsongii
Pathway
ayu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ayu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABLB98_11490 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ayu03021]
    ABLB98_11490 (rho)
   03019 Messenger RNA biogenesis [BR:ayu03019]
    ABLB98_11490 (rho)
Transcription machinery [BR:ayu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ABLB98_11490 (rho)
Messenger RNA biogenesis [BR:ayu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ABLB98_11490 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Sulfotransfer_1 AAA_22 NACHT AAA_25 S1CSD-TOTE-2 OB_RNB AAA GpA_ATPase
Other DBs
NCBI-ProteinID: XDO82312
LinkDB
Position
2404274..2405542
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLIMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVVASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMSEENLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
AN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacttaactgaactcaagaaaaaacccattggcgaactcattaaaattgcggagttt
atgggccttgaaggcatggcacgtaaccgtaaacaagatattatttttgccattttaaaa
cgccatgccatgaatggcgaagaaatttttggtgatggtgttctcgaaattctttcagat
ggttttggctttttacgctctgctgctggttcatatttagcaggaccagatgatatctat
gtcagcccatcacaaatccgtcgttttaacttacgtacgggtgataccattactggtact
attcgtccaccaaaagaaggcgaacgttactttgcattactcaaagttaatcaaattaac
tatgacacacctgagaactcgcgtaataaaattttattcgagaacttaacgcctctcttc
ccaacagaacaactgattatggaattgggcaatggtacaactgaagacctcactgcccgt
gtagttgatctggtggcaccgattggtaaaggtcaacgttctattattgttgcaccgcct
aaagcgggtaaaacaatgctattacaaaacattgctcaatccattgtgcgtaataatcct
gaagtgttcttaatcgtacttttgattgacgaacgtcctgaagaagttacagaaatggaa
cgtactgttcgcggtgaagttgtggcatcaacatttgatgaagcacctgctcgccatgtt
caggttgcagaaatggtgattgagaaagcaaaacgtttagttgagcataaaaaagacgtt
gtgattttacttgactcaattactcgtcttgcccgcgcctacaacactgtgattccatca
tcaggtaaggtattaaccggtggtgtggatgctcatgcattagaacgccctaaacgtttc
ttcggtgctgcgcgtaacatcgaagaaggtggttctctaaccatcatttcaactgctttg
atcgaaacaggcagtaaaatggatgatgtaatttacgaagaatttaaaggtacaggtaac
caagaaattacgctggatcgccgtatcgcagagaaacgagtattccctgcaatgaatatc
aaaaaatctggaactcgtcgtgaagagcgcctaatgagcgaagaaaatctacgtaaagtt
tggattttacgcaaattgcttcaccctatggatgaacttgctgcaatggaattcttatta
gatcgtatgaaggaaaccaaaactaatgatgacttctttgatcaaatgaaacgtaaagcg
gctaactaa

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