Aster yellows witches'-broom phytoplasma AYWB: AYWB_010
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Entry
AYWB_010 CDS
T00314
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03030
DNA replication
ayw03430
Mismatch repair
ayw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYWB_010 (holA)
03430 Mismatch repair
AYWB_010 (holA)
03440 Homologous recombination
AYWB_010 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ayw03032
]
AYWB_010 (holA)
03400 DNA repair and recombination proteins [BR:
ayw03400
]
AYWB_010 (holA)
Enzymes [BR:
ayw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYWB_010 (holA)
DNA replication proteins [BR:
ayw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYWB_010 (holA)
DNA repair and recombination proteins [BR:
ayw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYWB_010 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ABC65127
UniProt:
Q2NKB6
LinkDB
All DBs
Position
complement(10110..11081)
Genome browser
AA seq
323 aa
AA seq
DB search
MEKTNNIHLIWGKQRFFLEKKIKKIINVCKQKKLDVVYYCMQKDIVTELKKELQNTSLIE
NTWKKVILVDHSEILFQKKTQEIAFLISYLQNPYKNLDLYFFAEKTTKTSEVQKIWEKHC
ICKTTNSLEKKDFFKYIMDVFQKDGFKIDTKTIQELASKTNYNLYFLHQEITKIKLCQTN
DKNITWQMVQKINAFKKNDNIFGLINLFLKQNYIDAYQIYKTLKMQKINAFNVINRLTHK
IKELLLVKELLQQKNNPEELQKVLAVSQGKVFFLIKEAKLIETTKLNTLFLDLIELEYKI
KEGTINKDIGLEIFLLGKQKVFL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaacaaataacatacatttaatttggggaaaacaaaggttttttctagaaaaa
aaaataaaaaaaataattaatgtttgcaaacaaaaaaaattagatgtagtttattattgt
atgcaaaaagatattgtaacagaacttaaaaaagaactgcaaaacacttctttaattgaa
aacacatggaaaaaagtaattttggtggatcacagtgaaattttatttcaaaaaaaaact
caagaaattgcttttttaatttcttatttacaaaatccttacaaaaatttagatttatat
ttttttgcagaaaaaacaactaaaacatctgaagttcaaaaaatttgggaaaaacattgt
atttgtaaaacaacaaatagtttagaaaaaaaagatttttttaaatatatcatggatgtt
tttcaaaaagatggttttaaaattgatacaaaaactatccaagaattagcgagtaaaact
aactataatctttattttttgcatcaagaaataacaaaaatcaaattatgtcaaacaaat
gataaaaatataacttggcaaatggtacaaaaaatcaatgcttttaagaaaaatgacaat
atttttggattaattaatctttttttaaaacaaaattatattgatgcttatcaaatttat
aaaaccttgaaaatgcaaaaaatcaatgcttttaatgttataaatcgattaactcataaa
attaaagaattgttattggtaaaagaattattgcaacaaaaaaacaacccagaagaattg
caaaaagttttggcagtttcacaaggaaaagtattttttttaataaaagaagcaaaattg
attgaaacaacaaaattaaatacactgtttttagatttaatagaattagaatataaaatt
aaagaaggtaccataaataaagatattggtttggaaatttttttattgggtaagcaaaag
gtttttttgtaa
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