Aster yellows witches'-broom phytoplasma AYWB: AYWB_115
Help
Entry
AYWB_115 CDS
T00314
Symbol
uvrD
Name
(GenBank) UvrD helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03420
Nucleotide excision repair
ayw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYWB_115 (uvrD)
03430 Mismatch repair
AYWB_115 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ayw03400
]
AYWB_115 (uvrD)
Enzymes [BR:
ayw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYWB_115 (uvrD)
DNA repair and recombination proteins [BR:
ayw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYWB_115 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AYWB_115 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
AAA_12
ResIII
DEAD
DUF3391
T2SSE
GpA_ATPase
NAT10_TcmA_helicase
SRP54
Motif
Other DBs
NCBI-ProteinID:
ABC65232
UniProt:
Q2NK11
LinkDB
All DBs
Position
complement(133071..135356)
Genome browser
AA seq
761 aa
AA seq
DB search
MINNEIKGIKMFSNKNNFLEKLNKPLNQTQLAAVTSNAKSFYLAAGAGTGKTTTLTAKIA
YLIEQKKLPSNQILALTFTNKAVKQMKEKLDQMIGKEKTKGITICTFHSLGTQILRKFIP
FLPFSYRNNFKILDDNDCKKILKDILKEMNIDPKRVKISELKKSISDIKRKHEPQNEDTL
QHSTQKEKNYQREKKYEFEMPIKVKYQIFLQNNNLVDFDDLILYTHQLLQENANVRVFYQ
QKFQYLLVDEFQDTDFFQYQILTLLAKEHQNIFVVGDPDQNIYSFRGARFENSQLFLNKF
KPKIAFLEENYRSSKNILDKANLLIKYNKAHLFKKNLKSTKSGGEPVICKFFADYKEETR
YIAKTIQNLVLQGVYSYQDFTILYRTNILGRPLEEKFLANNIPYQVFGGASFYQSKLVKD
FLAYLNFIANPSQDFNFKRIINTPKRGIGTTSLLHLEKLAQEKKITLFDTLKYLDQTPIQ
PNAKTKLNELKKLITNLRQKLINDSFDCLSDIITYIDEKIEYCRKNDETCKMQSIKDSDS
DLYYIEELKSVFMQAEKNLEGSIFEKLTQLLDQISLYNETNEQTEQDSKNPSKNDRVKLS
TIHKVKGLEFRVVFITAFEDIFFDCNQKEKSDLEESRRLAYVAVTRAEEKLFLTGAYQRF
SYGKQIDSQPSRFLQEMGIFQKETPRSNYFSPHLFQPNQSNQASFTNGNGFFQKGDKVKH
KTLGLGVVEAIMQDLIQVRFINYQNVKIFENTNDFLAKIKE
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaacgaaataaaaggtataaaaatgttttccaataaaaacaattttttagaa
aaattaaataaacccttgaatcaaacccaacttgcagcagtcacaagcaatgctaaatct
ttttatctagcagcaggcgcaggaactggtaaaaccaccactttaactgctaaaattgct
tatttaatcgaacaaaaaaaattgccaagcaaccaaattttagcccttacttttaccaac
aaagctgttaaacaaatgaaagaaaaacttgaccaaatgattggtaaagaaaaaaccaaa
ggcattactatttgcacttttcactctttaggaacccaaattttgagaaaatttattccc
tttttgccattttcatatcgcaacaatttcaaaattttagatgacaatgattgcaaaaaa
atcctcaaagacattttaaaagaaatgaacatagatccaaaaagagtaaaaattagtgaa
ttaaaaaaaagcatttctgatattaaaagaaaacacgaaccacaaaatgaagatactttg
caacactcaacccaaaaagaaaagaattatcaacgtgaaaaaaaatacgaattcgaaatg
ccaataaaagtcaaatatcaaatttttttgcaaaacaacaatttagttgattttgatgac
ctaattttatacacgcaccaactgctccaagaaaatgccaatgtaagggttttttatcaa
caaaaattccaatatttattagttgatgaattccaagatactgatttttttcaataccaa
attttaactcttttagccaaagagcaccaaaatatttttgtagtaggggatcctgaccaa
aacatttattcttttcgaggagccagatttgaaaacagccaattattcttaaacaaattt
aaacctaaaatagcctttttggaagaaaattaccgttcttctaaaaatattctagacaaa
gccaatcttttaatcaaatacaacaaagcccacctttttaaaaaaaatctcaaaagcact
aaaagcggaggagagcctgttatttgcaagttttttgcagattacaaagaagagacaaga
tacatcgcaaaaacgatacaaaacctcgttttacaaggtgtttatagctatcaagatttt
actattttatatcgcactaatattttgggacgccctttggaagaaaaattcttagcaaac
aacattccttatcaagtttttggaggtgcttccttttaccaaagcaaattagtcaaagat
tttttagcttatctcaattttattgcaaatccctcacaagattttaattttaaacgtatc
attaacacccctaaaagaggcattggaacaacttctcttttacatctagaaaaacttgct
caagaaaaaaaaataactctttttgacacccttaaatacctagaccaaactccaattcaa
ccaaatgcaaaaactaaactaaacgaattaaaaaaattaattacaaatttgcgccaaaaa
ctaattaatgattcttttgactgtcttagtgatataattacttatattgatgaaaaaatt
gagtattgtcgtaaaaacgatgaaacttgcaaaatgcaatcaataaaagattctgattct
gatttatattacatagaagaattaaaatcagtttttatgcaagcagaaaaaaatttggaa
ggaagcatttttgaaaaattaacccaacttttagatcaaatatctttgtataatgaaact
aacgaacaaaccgaacaagactccaaaaacccaagcaaaaacgatcgcgttaaactttct
actattcacaaagtcaaaggtttagaatttagagtggtttttataactgcttttgaagat
attttttttgattgtaaccaaaaagaaaaaagcgatttagaagaatcaagacgtctagct
tatgtagcagttacaagagctgaagaaaagttatttttaactggggcttatcaaagattt
tcatacggcaaacaaatagacagccaaccttcgcgctttttacaagaaatgggaattttt
caaaaagaaacgccaagatcaaattatttttccccacatttatttcaacctaaccaatca
aaccaagcatctttcactaatggaaatggcttttttcaaaaaggagacaaagtcaaacac
aaaactctcggcttaggtgtagttgaagctatcatgcaagatttaatccaagtgcgtttt
ataaattaccaaaatgtaaaaatatttgaaaatacaaatgattttcttgctaaaataaaa
gagtaa
DBGET
integrated database retrieval system
