Aster yellows witches'-broom phytoplasma AYWB: AYWB_241
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Entry
AYWB_241 CDS
T00314
Symbol
rpsD
Name
(GenBank) SSU ribosomal protein S4P
KO
K02986
small subunit ribosomal protein S4
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AYWB_241 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ayw03011
]
AYWB_241 (rpsD)
Ribosome [BR:
ayw03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AYWB_241 (rpsD)
Bacteria
AYWB_241 (rpsD)
Archaea
AYWB_241 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
S4_2
Helic-prim_T7_N
Motif
Other DBs
NCBI-ProteinID:
ABC65358
UniProt:
Q2NJN5
LinkDB
All DBs
Position
248691..249287
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AA seq
198 aa
AA seq
DB search
MSRYTGSLWKVSRRLNYSVSETGKELHKRAYGPGQHGQKKVKLSDYGFQLQEKQKLRFTY
GVSEKQFRKTFDNASKLKGIHGEMFLVLLESRLDNVVYRLGFAKTRAQARQLVNHGHILV
DGKKVDIASYRLKPGQTVTLREKSKNLNIVQEALNSKFVRADYVSLDKELVGKYVRYPQR
NEFLPDINEQLIVEYYNR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgttatacaggttcgctttggaaagtttcaagacgccttaattattcggtttca
gaaactggaaaagaattgcacaaaagagcttatggtccaggacaacacggtcaaaaaaaa
gttaaattaagtgattatggttttcaattgcaagaaaaacaaaaattacgtttcacttac
ggcgtatcagaaaagcaatttcgcaaaacttttgataatgcaagtaaactaaaagggatt
catggtgaaatgtttttagtactattagaatctcgtcttgataacgtagtttatcgttta
ggatttgccaaaacaagagctcaagcaagacaattagttaatcacggccatattttagta
gatggaaaaaaagtagatattgcttcttatcgtttaaaaccagggcaaacagttacttta
agagaaaaatctaaaaatctaaatattgtacaagaagctttaaatagtaagtttgttcgc
gcagattatgtttctttagataaagaattagtgggtaaatatgtaagataccctcaaaga
aacgaatttttaccagatattaacgaacagttaatagttgaatattataatagataa
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