Aster yellows witches'-broom phytoplasma AYWB: AYWB_336
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Entry
AYWB_336 CDS
T00314
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYWB_336 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ayw03400
]
AYWB_336 (uvrA)
DNA repair and recombination proteins [BR:
ayw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYWB_336 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AYWB_336 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_16
nSTAND3
nSTAND1
AAA_29
RsgA_GTPase
AAA_25
AAA_18
SLFN-g3_helicase
AAA_22
AAA_33
ATPase_2
NACHT
cobW
AAA_14
ATPase
APS_kinase
AAA_21
AAA_23
Viral_helicase1
DnaJ_CXXCXGXG
AAA_7
BCA_ABC_TP_C
RNA_helicase
NTPase_1
T2SSE
MeaB
Motif
Other DBs
NCBI-ProteinID:
ABC65453
UniProt:
Q2NJE0
LinkDB
All DBs
Position
complement(359940..362858)
Genome browser
AA seq
972 aa
AA seq
DB search
MKNNKNQFIKVRGARQNNLKNINIDIPKNKLVIITGLSGSGKSSLAFDTLYQEGKRRYVE
SLSAYARQFLGSFEKPNVDSIEGLSPSISVDQKTTSNNPRSTVGTITEIYDYLRLIYANI
AFPFHPEKNIVLEKQTIEQMINKTNQTFPKQLVLILAPIIERKKGTHQKTLEALAKDGFN
RVIINDIIYLMDDIPSLTKNQYHNIYVVIDRFEVNSDNQTRLFEALEQALNLAQGKVFIM
DYKSKNSNDSNKDDNKNKKCQILKLNCNYHLEGINFDIPLRESRLFSFNTPLGACQICKG
IGKTAEIDCDMILDYEKPLNKDAILIFKSNNEYNNFASKEQELKAVCNHYQIDMTVPLKK
IDPQKLNIILYGSPDQIPLTPPLCFSRFSKNTTTKTLKCDFFEGIASMLKRRFEETTSEW
LKKWLSNYMMEKKCKKCQGQRLNQGALLFKINNKNIYEITDLSIEQTLAFFQNLELSKKD
TKIINLALKEVINRLTFLKEIGLGYLSLSRSVTTLSGGESQRIRLATQIGSQLSGVLYVL
DEPSIGLHQKDNDLLIKSLKKMRDLGNSLIVVEHDHDTMLASDYLIDIGPQAGIFGGKVQ
AFGTPQEVMKNKNSLTGKYLSKKIQIKVPKIRRKGNKDHILVTKASKNNLKSINVCFPMQ
QLIVVTGVSGSGKSTLVNDVLLDCLQKKYSKKNKNQQKDFSHLVNDFNKVKKIVEISQDP
IGKTPRSNPLTYTGVFDEIRELYSKTKEAQMKGYQKGRFSFNVKGGRCEVCSGDGVKKIS
MHFLPDVYVMCEACKGTRYQKETLSIKYKDKNIADILAMSVEEGVLFFQNHPKIKHQLEI
LQNVGLGYIKLGQSSPTLSGGEAQRVKLASELHKKVIPGALYILDEPTTGLHSEDVRQLL
KVLHQMTDKKATIVVIEHNLDVIKNADYIIDLGPEGGACGGYVVATGTPEQVSQNEKSYT
GKYLKKILDEKK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataataaaaatcaatttattaaagtccgcggggctcgtcaaaataatttaaaa
aatattaatattgatattcctaaaaataaattagttattataacaggattatcaggttct
ggaaaatcttctttagctttcgatactttatatcaagaaggaaaaagaaggtatgtagaa
tcgttaagtgcttatgctagacaatttttaggtagttttgaaaaacctaatgtagatagt
attgaaggtttgagcccttctattagcgttgaccaaaaaacaacttctaataatcctcgt
tctactgtgggaactattacagaaatatatgattatttaagattaatttatgccaatatt
gcatttccttttcatcctgaaaaaaatattgttttagaaaaacaaaccatcgaacaaatg
attaataaaactaatcaaacttttcccaaacaactagtcttaatccttgctcctataatt
gaaagaaaaaaaggaacccatcaaaaaaccttagaagctcttgccaaagatggttttaat
agagtaataattaatgatattatttatttaatggacgatattccttctttaacaaaaaat
caatatcataatatttatgtagtaattgatcgttttgaagttaattcagataatcaaact
cgtctttttgaagccttagagcaagctctaaatttagctcaaggaaaagtttttattatg
gattataaaagtaaaaatagtaatgatagtaataaggatgataataaaaataaaaaatgt
caaatattaaaactaaattgcaattatcatttagaaggtattaattttgatattccttta
cgtgaatcaagacttttttcatttaatactcctttaggagcttgccaaatttgtaaaggg
attggaaaaacagcagaaattgattgtgatatgattctagattatgaaaaaccattaaat
aaagatgccattttaatttttaaaagcaataatgaatataataatttcgctagcaaagaa
caagaattaaaagctgtatgcaatcattatcaaattgatatgactgttcctttaaaaaaa
atagatccccaaaaactaaatattattctttatggttcacctgaccaaatacctttaact
cctcctttgtgtttttctcgtttttccaaaaataccaccaccaaaactcttaaatgtgat
ttttttgaaggtatagcttctatgcttaaaagacgttttgaagaaacaacaagcgaatgg
ctcaaaaaatggctttctaattatatgatggaaaaaaaatgcaaaaaatgtcaaggacaa
agacttaatcaaggggctttactttttaaaatcaataacaaaaatatttatgaaataact
gatttatcaattgaacaaacccttgcttttttccaaaatttagaattgtcaaaaaaagat
acaaaaattattaatttagccctcaaagaagttattaatcgtcttacttttttaaaagaa
attgggttaggatacctttctttatcgcgtagtgtaacaactctttcgggaggagaatca
caaagaattaggttagctactcaaattggctcccaactttcaggagtgctttatgtcctt
gatgaaccttcaattggattgcaccaaaaagacaacgatcttttaattaaatcacttaaa
aaaatgcgagatttaggtaattctttaattgtagtagaacacgatcatgatacaatgctt
gcttccgattatttaattgatattggccctcaagcaggtatttttggaggaaaagtacaa
gcttttggaacgccccaagaagtaatgaaaaacaaaaatagtcttacaggaaaatattta
tccaaaaaaatccaaattaaagttcccaaaattagaagaaaaggtaataaagatcatatt
ttagtaaccaaagcttccaaaaataatcttaaatcaattaatgtttgctttcctatgcaa
caattaattgtagttacaggcgtttctggttcgggaaaatctactttagtaaatgatgtt
ttgcttgattgcttacaaaaaaaatacagcaaaaaaaataaaaaccaacaaaaagatttt
agtcatttagttaatgattttaacaaagtcaaaaaaatagttgaaatttcacaagaccca
attggtaaaactcctcgcagcaatccccttacttatactggtgtttttgatgaaattaga
gaactttactccaaaaccaaagaagcccaaatgaaaggttatcaaaaagggcgtttttct
tttaacgttaaaggcggtagatgtgaggtttgtagtggagatggagtcaaaaaaatatct
atgcattttttaccagatgtctatgttatgtgcgaagcttgtaaaggaactcgttatcaa
aaagaaactttaagtatcaaatacaaagataaaaatattgcagatattcttgctatgagt
gttgaagaaggtgttttatttttccaaaatcatcctaaaattaaacatcaattagaaatt
ttacaaaatgtagggcttggttatattaaattaggacagtcctcaccaactttatctgga
ggagaagcccaacgagttaaattagcaagcgaactacacaaaaaagttattccaggtgct
ttgtatattttagatgaacctaccacaggacttcattcagaagatgttagacaattactt
aaagttctacatcaaatgacagataaaaaagctactattgttgtaattgaacataattta
gatgtaattaaaaacgctgattatataattgatttaggtcctgaaggaggagcttgtggt
ggatatgtagttgcaacaggaaccccagaacaagtaagtcaaaatgaaaaaagttatact
ggtaaatatttaaagaagattcttgatgaaaaaaaataa
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