Aster yellows witches'-broom phytoplasma AYWB: AYWB_398
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Entry
AYWB_398 CDS
T00314
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYWB_398 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ayw03400
]
AYWB_398 (uvrC)
DNA repair and recombination proteins [BR:
ayw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYWB_398 (uvrC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH_2
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
ABC65515
UniProt:
Q2NJ78
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All DBs
Position
408194..409963
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AA seq
589 aa
AA seq
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MSILLEKIKTLPPNPGCYLFKNTKDTIIYVGKAKNLKKRVQSYFTKRNNLKTAMLIEETQ
DFFYIITNNEQEALILEANLIKTHTPKYNFKLLDDKTYPYIEITKEKHPQLKISRFKQIP
PGKIIFGPYPNLKSTKETLKLLHLLYPLRRCQLASKKPCLHFHINQCLGACAGKTINYKP
NIDAITKFLKGNIKDILKKLHHLMQKASEKMFYEKAQEYRDIIDSIKQTTKKQLISNQKL
KNCDIFAYAFNQDQIAIQILKIRQGNIVDSYRSVFSYVGFVCENILTYLNCYYQKNIKPD
IIITGKNQDENILQQTITNQTLLEQILQTKVNIYHKGDKKKLFLLALKNAQNDLSHNNLI
YQSKDQKIQEALNKLAIIFNKDIKRIDVFDNSQLFGKAFVAARIVFNHFEFDKKLYRTFH
IKGELPNEYQAFEETLTRCYNKGKEAENDATDLILVDGSLVQLRQSQKTLKKLGYEIPLG
ALQKNNKHQLTHLVTFQEKLMLEQDPNLFHFLKSLSEEVHRFAVSFHRKTKKKLDYKTTL
SNIKGVGVVRKKAILNHFESLEAIKKATLQDFQKIGINQKLFLLIKKSL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattcttttagaaaaaataaaaactttaccgcccaatcctggttgttatcttttt
aaaaacacaaaagacacaatcatttatgttggtaaagccaaaaatttaaaaaaacgcgtc
caaagttattttaccaaaagaaacaacttaaaaacagcgatgttaattgaagaaacccaa
gactttttctacattattactaacaacgaacaagaagccttaattttagaagctaactta
atcaaaacacacactcctaaatataatttcaaacttttggatgacaaaacttatccttat
attgaaattaccaaagaaaaacacccacaattaaaaatttcacgattcaaacaaattcct
ccaggaaaaataatttttggtccttatcccaatcttaaaagcaccaaagaaaccttaaaa
ttgttgcatcttttgtatcctttaaggagatgtcagttagcatcaaaaaaaccgtgtctt
cattttcacatcaatcaatgcctcggcgcttgtgcaggaaaaacaattaattataagcct
aatattgatgcaattactaaatttttaaaaggcaatatcaaagatattttaaaaaaatta
caccatttaatgcaaaaagccagcgaaaaaatgttttatgaaaaagcccaagaataccgc
gacattattgattcaatcaaacagaccacaaaaaaacaacttatcagtaatcaaaaactc
aaaaattgcgatatttttgcctatgcatttaatcaagaccaaatagcaattcaaatttta
aaaattcgccaaggaaatatcgttgattcttatcggagtgttttttcatatgttggcttt
gtatgcgaaaatattttaacttatcttaattgttattatcaaaaaaacattaaaccagat
ataattattacaggaaaaaaccaagatgaaaatattttgcaacaaacgataactaaccaa
actttattggaacaaatcttgcaaaccaaagtaaatatttatcataagggagacaaaaag
aaactttttttactagccttaaaaaacgcccaaaatgatttatctcacaataatttaatc
tatcaatccaaagaccaaaaaatacaagaagcattaaacaaattggcaattatttttaat
aaagatatcaaaagaattgatgtttttgacaattctcaactatttggaaaagcctttgtg
gcggcaagaattgtgtttaatcattttgaatttgacaaaaaactttatcgaacttttcac
attaaaggtgaattacctaacgaatatcaagcttttgaagaaacacttacgcgttgttat
aacaaaggcaaggaagctgaaaatgatgcaacagatttaattttggttgatggcagttta
gtacagctaaggcaaagccaaaaaactttaaagaaactgggctatgaaattcctttagga
gcattgcaaaaaaataacaaacatcaattaactcatcttgtaacttttcaagaaaaatta
atgttggaacaagatcctaatttatttcattttttaaaaagtttaagcgaagaagtccat
cgtttcgccgtttcttttcaccgcaaaaccaaaaaaaaactggattataaaaccacttta
tcaaacataaaaggagttggcgttgttagaaaaaaagccatattaaatcattttgaaagt
ttagaagccatcaaaaaagctactttgcaagattttcaaaaaataggaattaatcaaaaa
ttgtttttgttaattaaaaagagtttatag
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