Aster yellows witches'-broom phytoplasma AYWB: AYWB_556
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Entry
AYWB_556 CDS
T00314
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AYWB_556 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ayw03400
]
AYWB_556 (ung)
Enzymes [BR:
ayw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AYWB_556 (ung)
DNA repair and recombination proteins [BR:
ayw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AYWB_556 (ung)
Prokaryotic type
AYWB_556 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF1643
MIOS_a-sol
Motif
Other DBs
NCBI-ProteinID:
ABC65673
UniProt:
Q2NIS0
LinkDB
All DBs
Position
complement(574992..575630)
Genome browser
AA seq
212 aa
AA seq
DB search
MWQIINNQKTKPYFKKIFTFLQEEKTNHKIIYPNQEDIFAAFNLTPFEKVKVVILGQDPY
HRKNQAHGLSFSVKTLQKPPSLSNIFKELKNDLQIAACTNNLTKWALEGVLMINAILTVE
KDKPLSHHQIGWQEFTKTIFQALQAKPHIVYVLWGKFAQKYEQYICQSRNCIIKSPHPSP
FSAHRGFFGSKPFSRTNTYLQTCGIKAVDWNL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaatcattaataatcaaaaaaccaaaccttattttaaaaaaatatttactttt
ttgcaagaagaaaaaaccaatcacaaaattatttatcccaatcaagaagatatttttgca
gcttttaatttaactccttttgaaaaagtgaaagtagttattttggggcaagatccttat
catcgcaaaaatcaagctcacggtttgtcttttagtgtaaaaacactccaaaaaccacct
agtttatccaatatttttaaagaattaaaaaatgatttacaaattgctgcttgcaccaat
aatttaactaaatgggcactagaaggcgttttgatgattaatgctattttgactgttgaa
aaagataaacccttaagtcatcatcaaattggttggcaagaatttaccaaaactattttt
caagctttgcaagctaaaccgcatatagtttatgttttgtggggcaaatttgctcaaaaa
tacgaacaatacatttgtcaatcccgaaattgcataattaaaagtccccatccttcccct
ttttccgctcatagaggtttttttggatctaaacccttttctcgaaccaatacttatttg
caaacttgtggaattaaagctgttgattggaatctttaa
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