Aster yellows witches'-broom phytoplasma AYWB: AYWB_600
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Entry
AYWB_600 CDS
T00314
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYWB_600 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ayw03019
]
AYWB_600 (groEL)
03110 Chaperones and folding catalysts [BR:
ayw03110
]
AYWB_600 (groEL)
03029 Mitochondrial biogenesis [BR:
ayw03029
]
AYWB_600 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ayw04147
]
AYWB_600 (groEL)
Enzymes [BR:
ayw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AYWB_600 (groEL)
Messenger RNA biogenesis [BR:
ayw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AYWB_600 (groEL)
Chaperones and folding catalysts [BR:
ayw03110
]
Heat shock proteins
HSP60 / Chaperonin
AYWB_600 (groEL)
Mitochondrial biogenesis [BR:
ayw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AYWB_600 (groEL)
Exosome [BR:
ayw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AYWB_600 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AYWB_600 (groEL)
Exosomal proteins of breast cancer cells
AYWB_600 (groEL)
Exosomal proteins of colorectal cancer cells
AYWB_600 (groEL)
Exosomal proteins of bladder cancer cells
AYWB_600 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABC65717
UniProt:
Q2NIM6
LinkDB
All DBs
Position
complement(624603..626213)
Genome browser
AA seq
536 aa
AA seq
DB search
MSKKILYGKEARKALLQGVDAIANTVKVTLGPKGRNVILEKAYESPAIVNDGVSIAKEIE
LKNPYQNMGAKLVYEVASKTNDKAGDGTTTATVLAQSMIHRGFDAIDAGANPVLVKEGIE
LASLTVAKKLLAKSKKVDDQEDIQNVASVSSGSQEIGKIIAQAMQKVGKDGVINVDESKG
FETELEVVEGLQYDKGYASPYFVSDRESMTVHLENALVLVTDHKISTVQEIVPILEEVVK
ASRPLLIVAEAVENEVLGVLVANKLRGTFNVVVTNAPGFGDNQKEMLKDIAVLTKANFVF
KDLNMKLADLKMDDLGNINKVIIKKDNTTLISNSKSPELEKRIQLLKTQIKNSTSDYETK
NLQERLAKLSGGVALIKVGAATDTELKDKKLRIEDALNATKAAITEGIVVGGGKALVEVY
QELKDTLVSDNKEVQQGIDLVVQSLLVPTYQIAYNAGFSGKDVVKQQLLQPSNFGFNAKE
GKYVCLLKEGIIDPTKVTRQAVINAASISALMITTEAAVVSFKENKDNNFDLGTQE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaatactttatggcaaagaagcaagaaaagctttattacaaggagtagat
gcaattgcaaatactgttaaagttactttaggacctaaaggacgtaatgttattttagaa
aaagcctacgagtcgcccgctattgtaaatgatggtgtttctattgcaaaagaaattgaa
ttaaaaaatccttatcaaaatatgggagcaaagttagtatatgaagtggcttctaaaact
aacgataaagcaggagatggaacaactacagcaactgttttggcacaaagtatgattcat
cgtggttttgatgcaattgatgcaggagctaatcctgttttagtaaaagaaggaattgag
ttagcttcattaacagttgcaaaaaaacttttagctaaatctaaaaaagtagacgaccaa
gaagatattcaaaatgtggcttctgtttcatcaggtagtcaagaaattggtaaaatcatt
gcccaagcgatgcaaaaagtaggtaaagatggagttattaatgttgatgaatccaaaggt
tttgaaacagaattagaagttgttgaaggattgcagtacgataaaggatatgcttctcct
tattttgtctctgatagagaaagtatgacagtacatttagaaaatgcgttagttttagta
actgatcataaaattagcaccgtgcaagaaattgtacctattttggaagaagtagtaaaa
gcatctagacctttgttaattgtagctgaagcagtggaaaatgaagttttaggggttttg
gtagctaataaattaagaggaacttttaatgtagttgtaactaatgctcctggttttggc
gataatcaaaaagaaatgttaaaagatattgcagtacttacaaaagctaattttgttttt
aaagatcttaatatgaaattagcagatttaaaaatggatgatttaggaaatatcaataaa
gttattattaaaaaagataatactactttgataagcaattctaaaagtcctgaattagaa
aaacgtattcaattattaaaaacccaaattaaaaattctacttctgattatgaaactaaa
aatttgcaagaaagattagctaaattatcaggaggagttgccttaattaaagttggggct
gcaactgatactgaattaaaagataaaaaattacgtattgaagatgctcttaatgctact
aaagctgctattactgagggaattgtagttggtggtggaaaagctttagttgaggtctat
caagaattaaaagatactttagtatctgataataaagaagtacaacaaggaattgatttg
gtagtacaaagtcttttagtgcctacttatcaaattgcttataatgcaggattttcaggt
aaagatgtagtaaaacaacaacttttacaaccctcaaattttggttttaatgctaaagaa
ggtaaatatgtttgtctattaaaagaaggcataattgatcctactaaagtaactcgtcaa
gctgttattaatgctgcttctatctctgctttgatgattacaactgaggctgctgttgta
agttttaaagaaaataaagataataactttgatttagggacacaagaataa
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