Azoarcus sp. KH32C: AZKH_0266
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Entry
AZKH_0266 CDS
T02502
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aza
Azoarcus sp. KH32C
Pathway
aza03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AZKH_0266 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aza03400
]
AZKH_0266 (recB)
Enzymes [BR:
aza01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AZKH_0266 (recB)
DNA repair and recombination proteins [BR:
aza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AZKH_0266 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_30
TelK_muzzle
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAL22612
UniProt:
H0Q0W5
LinkDB
All DBs
Position
312642..316370
Genome browser
AA seq
1242 aa
AA seq
DB search
MNRETLTAPQPLAPQPLMPLTFPLHGSRLIEASAGTGKTFTIAALYVRLVLGHGGDAAFA
RPLTPPEILVVTFTDAATKELRDRIRARLAEGAEYFFADPLAVGPKEPGKDFLHDLRAEY
PEEAWPGCARKLQLAAEWMDEAAVSTIHGWCKRMLSEHAFDSDSLFTQRLETDQRELLAE
VVRDFWRTFFAPLDAEDVGEIARWWQTPDELQGQLGKLLEHAEGLPDAAPPVESIAAARA
EKAKKLAQLKAPWPDWTQELEALLDAAVAAKQVVGSKIQKRYYQPWLDALAAWAADPAAD
ALDLKKGWERLSRHGLADAWKDGDPPDHPALDAIPALRAALADLPHAHAELLRFAARWVA
ARFAAEQQRHAQMGFNDLLTRLDAALRQPNGKRLAEVIRAQFPVALIDEFQDTDPVQYRI
FDAVYRIADNAPDTGLVLIGDPKQAIYAFRGADIFTYLAAREATGGRLYTLGTNYRSTVT
MVTAVNRCFEQAEGRDTGEGAFLFRTMEGNRVPFLPVAASGRRERLVVGDAAVPALTCWT
LEAPESGKVLGVGAYRGSMAAACAAEIVRLLNLGQRGRAGFLRDGELAGLRPADIAILVN
NRTEANAVREALAACGVRSVYLSDQESVFASAQAAELQLWLSACAEPDDDSLLRAALATA
SLGLPWEALDRLRLDELEWEDRVLQFREYRQCWREQGVLPMLRRLLGDFDVPRRLLACAD
GERALTDLLHLAELLQHASVALDGEHALIRHLAEQRADAGNGDDARKLRLESDADLVQVV
TIHKSKGLEYPLVFLPFACAFRETSSDELPLKWHDAAGRLHLTLAADAAAAGLADRERLG
EDLRKFYVALTRARHATWLGFAPVDGLHRSAPGYLLKGGATIAPDSLAATLVEFKGECED
IAIAAAPALSGQRFVPHAARVEIGPARTPRRAVREFWWIASYSGLRTEEGAAAEAPTQAA
ATPIAADTPAEETFAEILDEAPVAEAAIAPEDDTRLHRFARGAGPGTFLHELLEWAAREG
FGRVAARPERARDMIARRCAVRGWSHWTEPLTGWLLHFITTPLPLPDGATPRFADLAGCR
PEMEFWFETHHANLSRLDALVREHTLAAAPRPALVPGQLNGMLKGFIDLVFEYRGRYYVA
DYKSNWFGPDDAAYTADAMRDAVLAKRYELQYVLYLFALHRLLKSRLPDYDYDRHVGGAV
YLFLRGSHAPTRGLHCERPPRTLIEALDAEFGERVAAPEACR
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgaaaccctgaccgcgccccagccccttgcaccgcagcccctgatgccgctc
accttcccgctgcacggcagccgcctgatcgaggcgagcgcaggcaccggcaagaccttc
acgatcgccgcgctctatgtgcgcctcgtgctcggccacggcggtgacgccgccttcgcg
cgcccgctgaccccgcccgagatcctcgtcgtgaccttcacggatgccgcgaccaaggaa
ctgcgcgatcgcatccgcgcgcggctcgccgaaggcgccgagtacttctttgccgatccg
ctcgccgtcgggccgaaagagcccggcaaggacttcctgcacgacctgcgcgccgagtat
ccggaggaagcctggcccggctgcgcgcgcaagctgcagctcgccgccgagtggatggac
gaggccgccgtgtcgacgatccacggctggtgcaagcgcatgctgagcgagcatgccttc
gacagcgacagcctcttcacgcaacgcctcgaaaccgaccagcgagaactcctcgccgag
gtcgtgcgcgacttctggcggaccttcttcgcgccgctcgatgcagaagacgtcggcgag
attgcgcgctggtggcagacgcccgacgagctgcaggggcagctcggcaagctgctggag
cacgcagagggcttgccggacgcagcgccaccggtcgaatcgatcgctgccgcacgcgcc
gagaaggccaaaaagcttgcacagctgaaagcgccctggccggactggacccaggagctg
gaggcactcctcgacgcagcggtcgcagcgaagcaggtcgtaggcagcaagatccagaag
cgttactaccagccctggctcgatgcgctcgccgcatgggccgcggaccctgccgcggac
gcgctcgacctgaagaaagggtgggaacgcctgagccggcacgggctggccgatgcctgg
aaggacggcgacccgcccgatcatcccgccctcgacgcgatccccgcgctaagggccgcg
ctggccgatcttccccacgcccacgccgagctactgcgcttcgccgcgcgctgggtcgcg
gcgcgcttcgccgccgagcagcagcgccacgcgcagatgggcttcaacgatctgctgacc
cggctcgacgccgcgctgcgccagcccaacggcaagcggctcgccgaagtcatccgtgcg
cagttcccggtcgcgctgatcgacgaattccaggacaccgacccggtccaataccgcatc
ttcgacgccgtctaccgcatcgccgacaacgcgccggacaccggcctcgtgctgatcggc
gaccccaagcaggcgatctacgccttccggggcgccgatatcttcacctacctcgcggcg
cgcgaagcgaccggcggacggctctacacgctcggcaccaactaccgctcgaccgtgact
atggtcaccgccgtcaaccgctgcttcgagcaggccgaagggcgcgacacgggcgagggt
gccttcctcttccggacgatggaaggcaaccgcgtgcccttcctcccggtcgccgcgagc
gggcggcgcgagcggctcgtcgtcggcgacgcggccgttccggcgctgacctgctggacg
ctggaagcgcccgagtccggcaaggtgctcggcgtcggcgcctatcgcggcagtatggcc
gcggcctgcgccgccgagatcgtccgcctgctgaacctcggccagcgcggccgtgcgggt
ttcttgcgcgatggcgagctcgccggcttgcgtcccgccgacatcgcgatcctcgtcaac
aaccgcaccgaggccaacgccgtgcgggaagccctcgccgcgtgcggcgtgcgcagcgtc
tacctctccgaccaggaatccgtgttcgcgagcgcccaggctgccgaactccagctgtgg
ctctccgcctgcgccgaaccggacgacgacagcctgctgcgtgccgccctcgcgaccgcg
agcctcggcctgccgtgggaggcgctcgaccgcctgcggctcgacgagctcgagtgggaa
gaccgcgtgctgcagttccgcgaataccgacagtgctggcgcgagcagggcgtgctgccg
atgctgcggcggctgctcggcgacttcgacgtgccgcggcgcctccttgcctgcgcggac
ggcgaacgtgcgctgaccgacctgctgcatctggccgaactgctgcagcacgccagcgtc
gccctcgacggcgaacatgcgctgatccgtcatctcgccgaacagcgcgcggacgccggc
aacggcgacgacgcgcgcaagctccgcctggagagcgacgccgacctcgtccaggtcgtc
acgatccacaagtccaagggcctcgaatacccgctcgtcttcctgcccttcgcctgcgcc
ttccgcgagacctcgtccgacgagctgccgctgaagtggcacgacgcggccggacgcctg
cacctgacgctcgcggccgacgcagccgccgccgggctcgccgaccgcgaacggctcggc
gaggatctgcgcaagttctacgtcgcgctgacccgcgcccgccacgcgacctggctcggc
ttcgcgcccgtcgacggcctgcaccgcagcgcgccgggctacctcctcaaggggggcgcg
acgatcgcgccggattccctcgccgcgacgctcgtcgagttcaagggcgagtgcgaagac
attgcgatcgccgccgcccccgcgctgtccggccaacgcttcgtcccgcacgccgcccgc
gtcgagatcggccccgcccgcacgccccgccgcgcggtgcgcgaattctggtggatcgcg
agctactccggcctgcgcacggaggagggcgccgcagccgaagccccgacccaggctgcc
gcgacgccgatcgccgccgatactcccgccgaagaaaccttcgccgaaatcctcgacgaa
gcccctgtcgcggaggccgcgatcgcgcccgaagacgacacgcgcctgcaccgcttcgcg
cgcggtgccgggcccggcaccttcctccacgaactcctcgaatgggccgcccgcgaaggc
ttcgggcgcgtcgccgcgcggcccgagcgcgcccgcgacatgatcgcgcgccgctgcgcc
gtgcgcggctggagccactggacggagccgctcaccggctggctgctgcacttcatcacg
acgccgctgccgctgcccgacggcgccacgccccgtttcgcggacctcgccggctgtcgg
cccgagatggaattctggttcgagacccaccacgcgaacctgtcccgcctcgacgccctc
gtgcgcgaacacacgctcgccgccgccccgcgcccggcgctcgtcccaggccagctcaac
ggcatgctgaagggcttcatcgacctcgtcttcgaataccgggggcgctactacgtggcc
gactacaaatcgaactggttcggccccgacgacgcggcctacacggcggacgcgatgcgc
gacgccgtcctcgcgaagcgctacgaactgcaatacgtgctctacctcttcgcgctgcac
cgcctgctcaagtcgcgcctgcccgactacgactacgaccgccacgtcggcggcgccgtc
tacctcttcctccgcggcagccacgcgccgacgcgcggcctgcactgcgagcgcccgccg
cggaccttgatcgaggcgctcgatgccgaattcggcgagcgcgtcgccgcgccggaggcc
tgccgatga
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