Azoarcus sp. KH32C: AZKH_0267
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Entry
AZKH_0267 CDS
T02502
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aza
Azoarcus sp. KH32C
Pathway
aza03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AZKH_0267 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aza03400
]
AZKH_0267 (recD)
Enzymes [BR:
aza01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AZKH_0267 (recD)
DNA repair and recombination proteins [BR:
aza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AZKH_0267 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
T2SSE
NTPase_1
AAA_28
nSTAND3
AAA_7
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
BAL22613
UniProt:
H0Q0W6
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All DBs
Position
316367..318520
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AA seq
717 aa
AA seq
DB search
MKRIRSARPGADLMGDLFDPAPAAARAATLLADVPGLLQRWVDHGWLRPLDRAFAEFLRT
EAPDAAPLLLLAAALASHQLGRGHVCLDLAATLVDPRFALSLPPEGDDTLERPPLPDEAL
AGLTLADWRSALAHALLVASGAGNTPLVLVDTRLYLRRYWQYECDVRAGIADRLAASTAL
QAGLDPAAFRGALDALFPATDAVDWQKLACALAARSAFSIVTGGPGTGKTTTVVKLLALL
QSLALSGDQARPLRIRLAAPTGKAAARLNESIAGAVRRLSLDGLPDGENVREAIPTEVTT
LHRLLGSRPDTRHFRHDARNPLLLDVLVVDEASMVDLEMMAAVLAALPSAARLVLLGDKD
QLASVEAGAVLGELCARARDGHYTPATRDWIAEVTGAQIASHLVDDDGEPLDQAIAMLRV
SHRFTAESGIGRLAEAVNAGELTTMHALCSQGCADLAHVGLAGAEDPTFDGLITDGGRAN
FPGHGEGRVTGDRALAPPVGYRHYLRALRDGHPSLDAAQDAFDRWAQQVIAAHGQFQVLC
ALRRGPWGVEGLNQRIAQRLGTAGLIPASQGWYLGRPVLVTRNDYGLGLMNGDIGITLEL
PRLGPDGTPQWGLRVAFPAGDGSDGIRWVLPSRLQAVETVYAMTVHKSQGSEFTHAALVL
PDSLNPILTRELIYTGITRARHWLTLATAGPGRVLDEAVARQVLRASGLMKGGARSG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaatccgcagtgcccgccccggcgccgacctgatgggcgacctcttcgacccc
gcgccggccgcggcccgcgcggcgaccctcctcgccgacgttcccggcctgctgcagcgc
tgggtcgatcatggctggctgcgcccgttggaccgcgccttcgccgaattcctgcgcacc
gaagccccggacgccgcgccgctgctgctgctcgccgccgcgctcgcaagccaccagctc
ggccgcggccacgtctgcctcgacctcgctgcgacgctcgtcgacccgcgcttcgcgctc
tccctgccgcccgagggggacgacacgctcgaacgcccgcccttgcccgacgaagcgctc
gccggcctgacgctggccgactggcggtcggcgctggctcatgcgctgcttgtcgcaagc
ggggccggcaacacgccgctcgtgctcgtcgacacccgcctctacctgcgccgctactgg
cagtacgaatgcgacgtccgcgccggtatcgccgaccggctggcggcgagcactgcgctt
caagcgggcctggatccggccgccttccgtggcgcactcgacgcgctgttcccggccacg
gatgccgtcgactggcagaagctcgcctgcgcgctcgccgcccgcagcgccttcagcatc
gtcaccggcggtcccggcaccggcaagacgaccaccgtcgtcaagctcctcgcgctgctg
caaagcctggcactgagcggcgaccaggctcgcccgctgcgcatccgcctcgccgcaccg
accggcaaggccgccgcgcgcctcaacgaatcgatcgccggcgcggtgcggcgcctgtcc
ttggatggacttccggacggtgaaaacgtgcgcgaagcgatcccgaccgaagtgacgacg
ctgcaccgcctgctcggcagccgccctgacacccgccatttccgccacgatgcgcgcaat
ccgctgctgctcgacgtgctggtcgtcgacgaagcctcgatggtcgacctcgaaatgatg
gccgccgtcctcgccgcgttgccgtccgccgcgcgcctcgtgctcctcggcgacaaggac
cagctcgcctcggttgaggccggcgcggtgctcggcgaactctgcgcccgcgcgcgcgac
ggccactacacgccggccacgcgcgactggatcgcggaagtcaccggcgcgcagatcgcc
tcgcatctcgtcgacgacgacggcgagccgctcgatcaggcgatcgcgatgctgcgcgtg
agccaccgcttcaccgccgagagcggcatcggccgcctcgccgaagccgtcaacgcgggc
gagcttacaacgatgcacgcactgtgctcccaaggctgcgcggacctcgcccacgtcggc
ctcgccggtgctgaagacccgacctttgacggcttgatcaccgatggcggtcgcgcgaac
ttccccggccatggcgaagggcgcgtcacgggcgatcgggccttggcaccgccggtcggc
tatcgccactacctgcgagccctgcgcgacggccacccgtccctcgacgccgcgcaggac
gccttcgatcgctgggcgcagcaggtcatcgcggcgcacggccagttccaggtgctctgc
gcgctgcgccgcggcccctggggcgtcgaaggcctcaaccagcgcattgcgcagcggctc
ggcactgccgggctgatccccgcgagccagggctggtacctcggccgcccggtcctcgtc
acgcgcaacgactacggcctcgggctgatgaacggcgacatcggcatcacgctcgaactg
ccgcgcctcgggcccgacggcacgccgcaatggggcttgcgcgtcgccttccccgcgggc
gacggcagcgacggcatccgctgggtgctgccgagccgcctgcaggcggtcgagaccgtc
tacgcgatgaccgtccacaagtcccaaggctcggagttcacacatgcggcgctcgtgctg
ccggacagcctgaatccgatcctcacgcgcgagctcatctacaccggaatcactcgcgcg
cggcactggctgacgctcgccaccgccggccccggccgcgtgctcgacgaggccgttgcc
cggcaggtcctgcgcgcgagcggcctgatgaagggtggagcccgcagcgggtaa
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