Azoarcus sp. KH32C: AZKH_0436
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Entry
AZKH_0436 CDS
T02502
Symbol
hupA_B
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
aza
Azoarcus sp. KH32C
Brite
KEGG Orthology (KO) [BR:
aza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aza03032
]
AZKH_0436 (hupA_B)
03036 Chromosome and associated proteins [BR:
aza03036
]
AZKH_0436 (hupA_B)
03400 DNA repair and recombination proteins [BR:
aza03400
]
AZKH_0436 (hupA_B)
DNA replication proteins [BR:
aza03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AZKH_0436 (hupA_B)
Chromosome and associated proteins [BR:
aza03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AZKH_0436 (hupA_B)
DNA repair and recombination proteins [BR:
aza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AZKH_0436 (hupA_B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HTH_Tnp_4
HVO_A0261_N
HU-CCDC81_bac_2
DUF8073_C
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAL22782
LinkDB
All DBs
Position
495188..495466
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AA seq
92 aa
AA seq
DB search
MNKGEFVEALADRLDVSRAQADRALSTVLDIVAERMAAGEKVAFTGFGSFEVSERAERTG
RNPQTGATIKIAATRVPKFTPGATLKGAVNGK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtgaattcgtcgaagccctggctgaccgtctggacgtttcgcgcgcgcag
gccgatcgtgccctgtccaccgtgctggacatcgtcgccgagcgcatggctgccggcgag
aaggttgccttcacgggtttcggttcgttcgaagtgtccgagcgtgccgagcgcaccggc
cgcaatccccagaccggtgccacgatcaagatcgccgcgacccgcgtgccgaagttcacg
ccgggcgcaaccctgaagggcgccgtgaacggcaagtaa
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