Azoarcus sp. KH32C: AZKH_1189
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Entry
AZKH_1189 CDS
T02502
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
aza
Azoarcus sp. KH32C
Pathway
aza03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AZKH_1189 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aza03400
]
AZKH_1189 (xseB)
Enzymes [BR:
aza01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AZKH_1189 (xseB)
DNA repair and recombination proteins [BR:
aza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AZKH_1189 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
SKA1
Hydantoinase_B
Deam_C
DUF1184
Motif
Other DBs
NCBI-ProteinID:
BAL23518
UniProt:
H0PYY1
LinkDB
All DBs
Position
complement(1307500..1307745)
Genome browser
AA seq
81 aa
AA seq
DB search
MAQTANTPASFESAIAELESIVQAMETGSITLEQALEHYQRGTNLLKYCQETLQAAEQRV
QQLEGDTLVPQNAPEDRRKPE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggcacagacggccaacacgccggcatccttcgaatcggccatcgccgaacttgaatcc
atcgtacaggcgatggagaccggcagcatcacgctagagcaggcgctcgagcattatcag
cgcggcaccaacctgttgaagtactgtcaggaaaccctgcaggccgccgaacaacgcgtt
cagcaactcgaaggcgacacgctggtcccacagaacgcgccggaagacaggaggaagccc
gagtga
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