Azoarcus sp. KH32C: AZKH_1503
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Entry
AZKH_1503 CDS
T02502
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aza
Azoarcus sp. KH32C
Brite
KEGG Orthology (KO) [BR:
aza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aza03016
]
AZKH_1503
Enzymes [BR:
aza01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AZKH_1503
Transfer RNA biogenesis [BR:
aza03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AZKH_1503
Prokaryotic type
tRNA splicing ligases
AZKH_1503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BAL23824
LinkDB
All DBs
Position
1678218..1679648
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AA seq
476 aa
AA seq
DB search
MNLAKFRQRGTFEWVMAPSGRMRVPGVIFASRELIEAMDEKVAEQVANVASLPGIVTASY
AMPDAHWGYGFPIGGVAAFDADEGGVVSAGGVGFDISCGVRTLRTGLKLADVEAHKKRLA
DLLYARIPAGVGSTGVVHLSGAGMDAMLKGGARWAVKEGWGSEADLAHIEESGCAAGADP
AAVSDMAKKRQRDEMGTLGSGNHYLEVQVVDAVFDGEAAQAYGLEVGDVVVTIHCGSRGL
GHQIGTDYLREMAIAAPAAGIALPDRELACAPLKSDLGQRYLGAMRAGINCALANRQILT
HLARGAFAEVFPGVHLPVLYDVSHNTCKEESHRVGDTRRRLFVHRKGATRAFGPGHVELP
REYREVGQPVLIGGSMGTASWILAGAAGTEERAFGSACHGAGRAMSRHEALRRWQGRNIV
DELAARGILIRSPSLRGVAEEAPLAYKDVGAVVDAADRAGLALKVARLVPLVCVKG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggcgaaattccggcagcgcggcactttcgaatgggtgatggccccgagcggg
cgcatgcgcgtgcccggcgtgatcttcgcgtcgcgcgaactcatcgaggcgatggatgaa
aaggtcgcggaacaggtcgcgaacgtcgcgagcctgcccggcatcgtgaccgcatcgtat
gcgatgcccgacgcacactggggctacggtttcccgatcggcggggttgcggccttcgac
gccgacgagggcggcgtggtgtcggccggcggcgtcggcttcgacatctcctgcggcgtg
cggacgctgcgcaccgggctcaagctcgccgatgtcgaggcgcacaagaagcggctcgcc
gacctgctgtacgcgcgcattccggccggcgtcggtagcaccggtgtcgtgcatctgtcg
ggcgcggggatggacgcgatgctgaagggcggcgcgcgctgggcggtgaaggaaggctgg
ggcagcgaggcggatctcgcgcacatcgaggagtcgggctgcgccgcgggggccgatccg
gcggcggtgtccgacatggcgaagaagcgccagcgcgacgagatgggcacgctcggttcg
ggcaaccattacctcgaggtgcaggtcgtcgatgcggtgttcgacggggaggccgcgcag
gcctacgggctcgaagtcggcgacgtggtcgtgaccatccactgcggctcgcgcgggctc
ggccatcagatcggcaccgactacctgcgcgagatggcgatcgcggcgccggcggcgggc
atcgcgctgcccgaccgcgaactggcgtgcgcaccgctgaagtcggacctcggtcagcgc
tacctgggggccatgcgcgcggggatcaattgcgcgctcgcgaaccggcagatcctcacg
catctcgcgcgcggggccttcgccgaggtgtttccgggcgtgcatctgccggtgctctac
gacgtgtcgcacaacacctgcaaggaggagtcccaccgcgtgggggacacccggcggcgc
ctcttcgtgcatcgcaagggcgcaacgcgcgccttcggacccgggcacgttgagctgccg
cgcgaataccgcgaggtcggccagccggtgctgatcggcggcagcatgggcacggcgtca
tggatcctggccggtgcggccggcaccgaggaacgggccttcgggtcggcttgccatgga
gcggggcgtgcgatgagccgccacgaggcgctgcgacgctggcaggggcgcaacatcgtc
gacgagcttgcggcgcgcggcatcctgatccgcagcccgagcttgcgcggggtcgccgag
gaggcgccgctcgcctacaaggacgtcggcgcggtggtcgatgcggccgatcgcgcgggg
ctcgcgctgaaggtcgcgcggctcgtgccgctggtgtgcgtgaagggctag
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