Azoarcus sp. KH32C: AZKH_2216
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Entry
AZKH_2216 CDS
T02502
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
aza
Azoarcus sp. KH32C
Brite
KEGG Orthology (KO) [BR:
aza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aza03016
]
AZKH_2216 (ybbB)
Enzymes [BR:
aza01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
AZKH_2216 (ybbB)
Transfer RNA biogenesis [BR:
aza03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AZKH_2216 (ybbB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_18
AAA_33
AAA_22
AAA_23
SMC_N
FtsK_SpoIIIE
CoaE
Motif
Other DBs
NCBI-ProteinID:
BAL24527
UniProt:
H0PZJ4
LinkDB
All DBs
Position
complement(2517209..2518258)
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AA seq
349 aa
AA seq
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MKKGLATVAQLSEFDEFIDARSPAEFAEDRIPGAVSCPVLDNEQRAIVGTIYKQQSAFEA
RRIGAAMVAENIARHLRERFQDKPKNWRPLVYCWRGGQRSGSFVTWLRLIGWDACQLEGG
YKSWRHLVVDELAVLPGRFDFRVICGATGSGKTRVLEALGRLGAQVLDLEQLAAHKGSVL
GALPDRPQPTQKSFETDLYGVLRTFDPARPVYVEAESRKIGRIQVPEVLMARMRESHCVA
IEATREARLDFLVRDYAYLGDDVSDLQNKIDYLQGLQSNETLANWKALAAQHELYTLFAE
FIDKHYDPLYQRSQNRNFVRFPQAPIFASSNLSDAGIAELADCILREQQ
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcctcgcgaccgtagcacagctctccgaatttgacgagttcatcgacgcc
cgcagcccggccgaattcgccgaagaccgcatccccggcgccgtcagttgccctgtcctt
gacaacgagcagcgggcgatcgtcggcacgatctacaagcagcaatccgccttcgaagcc
cgccgcatcggcgccgcgatggtcgccgagaacatcgcgcgccatctgcgcgagcgcttc
caggacaagccgaagaactggcgtccgctcgtctattgctggcgcggcggccagcgcagc
ggctccttcgtcacgtggctgcgcctgatcgggtgggacgcctgccagctcgaaggcggc
tacaagagctggcgccacctggtcgtcgacgaactcgccgtcctgcccggccggttcgac
tttcgcgtgatctgcggcgcgacgggaagcggcaagacccgcgtgctcgaagcgctcggc
aggcttggcgcgcaagtgctggatctggaacagctcgccgcccacaaaggctctgtgctc
ggagcgctgcccgaccggccgcagccgacgcagaagtccttcgaaacggacctctacggc
gtgttgcggaccttcgacccggctcgtcccgtctacgtcgaggccgagagccgcaagatc
ggacgcatccaggttcccgaagtcctgatggcccgcatgcgcgaaagccactgcgtcgcg
atcgaagcgacgcgcgaagcgcgactcgacttcctcgtgcgggactatgcctacctcggc
gatgatgtaagcgatctgcaaaacaagatcgactacctgcagggcctgcagagcaacgaa
acgctggccaactggaaggcgctggccgcccagcacgagctctacacgctcttcgccgag
ttcatcgacaagcactacgatccgctctaccagcgttcgcagaaccgcaatttcgtccgc
tttccgcaagcgccgatattcgccagcagcaacctgagcgacgcgggcatcgcggagctt
gcagactgcattctccgcgaacagcagtga
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