Azoarcus sp. KH32C: AZKH_2861
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Entry
AZKH_2861 CDS
T02502
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aza
Azoarcus sp. KH32C
Pathway
aza03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AZKH_2861 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aza03400
]
AZKH_2861 (uvrB)
DNA repair and recombination proteins [BR:
aza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZKH_2861 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AZKH_2861 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_18
Kinesin
AviRa
IFP_35_N
HH_RND_rel
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAL25163
LinkDB
All DBs
Position
complement(3220313..3222373)
Genome browser
AA seq
686 aa
AA seq
DB search
MTHPSDSTPVITFEGSPFRLHQPFPPAGDQPSAIALLTEGITDGLMYQTLLGVTGSGKTY
TMANVIARSGRPALVLAPNKTLAAQLYAEFREFFPENAVEYFVSYYDYYQPEAYVPSRDL
FIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSCIYGIGDPVDYHAMILHLREGERM
AHRDLVQRLVAMQYTRSDIDFRRGTFRVRGDVIDVFPAENAELAVRIEMFDDEIEHLTLF
DPLTGHLKQKLVRFTVYPSSHYVTPRATVLQAIEAIKEELRERVDYFYRSGKLVEAQRIE
QRTRFDLEMLNEMGFCKGIENYSRHLSGRGPGEPPPTLIDYLPSDALFFVDESHVSIPQV
GGMYKGDRSRKDNLVQYGFRLPSALDNRPLRFEEFERLMPQTIFVSATPADYEATHQGQV
VEQVVRPTGLIDPAIEVRPATTQVDDLLSEAKRRIDVGERVLVTTLTKRMAEDLTDYLGE
NGIRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGF
LRSERSLIQTIGRAARHIHGKAILYADVITRSMRAAIDETDRRRAKQVAFNEANGIVPKT
VSKRIKDIIDGVYGSDEERSALHVADAPAEYFAFDEKTLAKRIKKLEKEMQEHARNLEFE
KAAAVRDQLFRLRQQAFGADQHGSGS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccgagcgacagcactccggtcatcaccttcgaggggagtccgttccgactt
catcagccgtttccgcccgcgggagaccagccgtccgcaattgctctgctgacggaaggg
atcacggatggcctgatgtaccagacgcttctgggcgtgaccggctcgggcaagacctac
acgatggccaacgtcatcgcgcgctccggccgcccggcgctcgtgctggcgccgaacaag
acgcttgcggcacagctctacgccgagttccgcgaattctttccggaaaatgccgtcgag
tatttcgtgtcgtactacgattactaccagccggaagcctacgtcccgtcgcgcgacctc
ttcatcgagaaggattcgagcatcaacgagcatatcgaacagatgcggctgtctgcgacg
aagagcctgatggagcggcgcgacgtcgtgatcgttgcgactgtgtcgtgcatctacggt
atcggcgatccggtcgactatcacgcgatgatcctgcatctgcgcgaaggcgagcgcatg
gctcatcgcgacctcgttcagcgcctggtggcgatgcagtacacgcgctcggacatcgat
ttccggcgcggaacgttccgcgtccggggcgacgtgatcgatgtgttccctgccgaaaac
gcggaacttgcggttcgcatcgagatgttcgacgacgagatcgagcatttgacgctcttc
gatccgctgaccgggcatctgaagcagaagctcgtgcgcttcaccgtctatccgtcgagc
cactacgtgacgccgcgcgccacggtgctgcaggccatcgaggcgatcaaggaggagttg
cgcgagcgcgtcgattacttctaccgctcgggcaagctcgtcgaggcacagcgcatcgaa
cagcgaactcgcttcgacctcgagatgttgaacgagatggggttttgcaagggcatcgaa
aattattcgcgtcatctgtcgggccgtggccccggggaaccgccgccgacgctcatcgac
tatctgccgtccgatgcgctgttcttcgtcgacgagtcccatgtgtcgatcccgcaggtc
ggcggaatgtacaagggggatcgatcgcgcaaggacaacctggttcagtacggcttccgc
ctgccgtcggcgctcgacaatcgtccgttacgattcgaagagttcgagcgcctgatgccg
cagacgattttcgtctcggccacccccgccgattacgaggcgacgcaccaagggcaggtg
gtcgagcaggtggtccggcccaccgggctcatcgaccccgccattgaggtccgtccagca
acgacgcaggtcgacgatctgttgtccgaagcgaagcgacgaatcgatgtcggcgagcgc
gtccttgtgacgacgctgaccaagcgcatggccgaagatcttacggactatctgggggaa
aacggcatccgtgtgcgttacctgcattcggacatcgataccgtggagcgcgtcgaaatc
atccgcgacctgcggcttggcgaattcgacgtcctcgtgggcatcaacctgctgcgggaa
ggtctggatattcccgaagtgtccctcgtcgcgatcctcgatgcggacaaggaaggtttc
ctcagatccgaacgctccctgatccagacgatcggccgcgcggctcgccacattcatgga
aaggcgatcctctacgccgacgtgatcacccggtcgatgcgtgcggccatcgacgaaacc
gaccggcggcgggccaagcaggtcgcgttcaacgaggcgaacggaatcgtccccaagacg
gtcagcaagcggatcaaggacatcatcgacggtgtctatgggagcgacgaagagcgcagt
gctttgcatgttgccgacgcgccggcggagtatttcgcattcgacgagaagacgcttgcg
aagcgtatcaagaaactggagaaggaaatgcaggagcacgcccgcaatctcgagtttgaa
aaggcagcggcggtacgtgatcaactctttcggctccgtcagcaggcattcggggccgac
caacatggaagcggcagctga
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