Azoarcus sp. KH32C: AZKH_3126
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Entry
AZKH_3126 CDS
T02502
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
aza
Azoarcus sp. KH32C
Pathway
aza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZKH_3126 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aza03021
]
AZKH_3126 (rho)
03019 Messenger RNA biogenesis [BR:
aza03019
]
AZKH_3126 (rho)
Transcription machinery [BR:
aza03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AZKH_3126 (rho)
Messenger RNA biogenesis [BR:
aza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AZKH_3126 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
Fungal_virus_P2_C
S1CSD-TOTE-2
NACHT
Mor
ATPase_2
AAA
AAA_22
Phostensin_N
Motif
Other DBs
NCBI-ProteinID:
BAL25424
LinkDB
All DBs
Position
3503966..3505225
Genome browser
AA seq
419 aa
AA seq
DB search
MHLSELKSLHVSQLLEMAVANEIEGANRLRKQELVFALLKNRAKKGEPIYGDGALEVLPD
GFGFLRSPDISYLAGTDDIYVSPSQIRRFNLHTGDTIEGEIRTPKDGERYFALVKLDKIN
GEAPENCKHKILFENLTPLHPNECLKLERDIRGEENVTSRIVDMIAPIGKGQRGLLVAPP
KSGKTVMLQHIAHAITANHPDVSLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLTEHKKDVVILLDSLTRLARAYNTVVPASGKVLTGGVDANALQKPKRF
FGAARNLEEGGSLTIIATALIDTGSRMDDVIYEEFKGTGNMELHLDRRMAEKRVYPAINV
NRSGTRREELLMKADVLQKVWVLRKLLYGMDDIDAMEFLLDKVKATKNNAEFFDAMRRG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcatctatcggagctcaagtctctccacgtcagccaactgcttgaaatggctgtggcc
aacgaaatcgaaggcgccaaccgcctgcgcaagcaggaactcgtttttgccctgctgaaa
aaccgcgccaagaagggcgaaccgatctacggcgacggcgccctcgaagtgctgcccgac
ggattcggcttcctccgttcccccgacatctcctacctcgcgggaacggacgacatctac
gtttcgccgtcccagatccgccgcttcaacctgcacacgggcgacacgatcgaaggcgag
atccgtaccccgaaggatggcgaacgctatttcgcgctagtgaagctcgacaagatcaac
ggcgaagcgcccgagaactgcaagcacaagatcctgttcgagaacctcacgccactgcat
ccgaacgagtgcctgaagctcgaacgcgacattcgcggcgaggagaatgtgacgagccgc
atcgtcgacatgattgccccgatcggcaagggtcagcgcggcctgcttgtcgccccgccg
aagagcggcaagaccgtgatgctgcagcacatcgcgcacgcgatcacggccaatcacccc
gacgtctcgctgatcgtgctgctgatcgacgaacgcccggaagaagtcaccgagatgcag
cgttcggtcaagggcgaagtcgtggcctcgaccttcgacgaacctgcgtcgcgccacgtg
caggttgccgagatggtgatcgagaaggccaagcgcctgaccgagcacaagaaggacgtc
gtgatcctgctcgactcgctgacccgcctcgcacgcgcctacaacacggtggtacccgcc
tccggcaaggtcctcaccggcggcgtggacgccaacgcgctgcaaaagccgaagcgcttc
ttcggcgcggcgcggaatcttgaagaaggcggttcgctgacgatcatcgcgaccgcgctg
atcgacacgggcagccggatggacgacgtgatctacgaggagttcaagggcaccggcaac
atggaactgcacctcgaccgccgcatggccgagaagcgggtgtacccggcgatcaacgtc
aatcgctccggcacgcgtcgcgaagaactgctgatgaaggcggacgtgctgcagaaagtg
tgggtgctgcgcaaactgctgtacggcatggacgacatcgacgcaatggaattcctgctc
gacaaagtcaaggcgacgaagaacaacgccgagttcttcgacgccatgcgtcgcggctga
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