Azorhizobium caulinodans: AZC_0008
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Entry
AZC_0008 CDS
T00609
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
azc
Azorhizobium caulinodans
Brite
KEGG Orthology (KO) [BR:
azc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azc03016
]
AZC_0008
Enzymes [BR:
azc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
AZC_0008
Transfer RNA biogenesis [BR:
azc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
AZC_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BAF86006
UniProt:
A8IG00
LinkDB
All DBs
Position
5584..6978
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AA seq
464 aa
AA seq
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MQEPRKLYVKSFGCQMNVYDSQRMADALAKEGYVETQDPADADLVILNTCHIREKAAEKV
YSELGRLRKAKQDAGSDTTIAVAGCVAQAEGAEIMKRAPVVDLVVGPQSYHRLPEMLARV
RDGKRVVDTEFPAEDKFDHLPAPSAAATKKRGPTAFVTVQEGCDKFCTFCVVPYTRGAEV
SRSVSKIVGEARALVDQGVREITLIGQNVNAFHGEGPDGRTWGLGRLLEELAGINGLARL
RYTTSHPRDMDDGLIAAHRDLPQLMPYLHLPVQSGSDRILAAMNRKHGREIYFEIIDKLR
AARPDIALSSDFIVGFPGETEADFEDTLDLARRVGFASAYSFKYSIRPGTPAAEHDHQLS
EEVKSERLARLHQVLEASKTAFDRACMGRRFDILLEKPGRLPGQLIGRSPYLQSVVVTAP
GAGIGDFVTVDITDVGPNSLAGQVVDAVEDRGRTSDRPLVAMEA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaccccgcaagctctacgtgaagtccttcggctgccagatgaacgtctacgac
tcgcagcgtatggcggacgccctggcgaaggagggctatgtggagacgcaggacccggcg
gatgccgacctcgtcatcctgaacacctgccatatccgcgagaaggccgccgagaaggtc
tattccgaactcgggcgcctgcgcaaagccaagcaggacgcgggttccgacaccaccatc
gccgtggccggctgcgttgcccaggccgagggcgccgagatcatgaaacgcgcccccgtg
gtggacctcgtggtggggccgcagagctatcatcgccttcccgagatgctagcgcgggtc
cgcgacggcaagcgtgtcgtggacaccgaatttcccgccgaggacaagttcgaccacctg
cccgctccgagcgcggcggccacaaagaagcgcggcccgaccgccttcgtgaccgtgcag
gaaggctgcgacaagttctgcaccttctgcgtcgtgccctacacgcggggggccgaagtc
tcccgctcggtctccaagatcgtgggcgaagcccgcgcgttggtggatcagggcgtgcgc
gagatcacgctcatcggccagaacgtcaacgccttccatggcgaggggccggacggaagg
acatggggccttggccggctgctggaagagctggccggcatcaacgggctggcgcgtctg
cgctacaccacctcccacccgcgtgacatggatgacggcctgatcgccgcccatcgcgac
ctgccccagctcatgccctatctgcacctgccggtgcagtccggctccgaccgcatcctc
gcggccatgaaccgcaagcacgggcgcgagatctatttcgagatcatcgacaagctgcgc
gccgcccggccggacatcgcgctgtcgtcggacttcatcgtcggcttccccggcgagacc
gaggccgatttcgaggacacgctggatctcgcccgccgggtgggcttcgccagcgcctat
tccttcaaatactccatccgtccgggcaccccggcggcggagcatgaccaccagctttcc
gaagaggtgaagagcgagcgtctcgcccgcctgcaccaggttctggaagcctccaagacc
gcgttcgaccgcgcctgcatggggcgccggttcgacatcctgctcgagaagcccggccgt
ctgccgggccagctcatcggccgctcgccgtatctccagagcgtcgtggtgaccgcaccc
ggcgccggcatcggcgacttcgtgaccgtcgatatcaccgacgtgggaccgaactctctg
gcgggacaggttgttgacgctgtcgaggatcgaggccgaacgagcgaccgcccgctcgtg
gccatggaggcttga
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