Azorhizobium caulinodans: AZC_2284
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Entry
AZC_2284 CDS
T00609
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
azc
Azorhizobium caulinodans
Brite
KEGG Orthology (KO) [BR:
azc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azc03032
]
AZC_2284
03400 DNA repair and recombination proteins [BR:
azc03400
]
AZC_2284
Enzymes [BR:
azc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AZC_2284
DNA replication proteins [BR:
azc03032
]
Prokaryotic type
DNA Topoisomerases
AZC_2284
DNA repair and recombination proteins [BR:
azc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AZC_2284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BAF88282
UniProt:
A8I5I3
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All DBs
Position
2608584..2609729
Genome browser
AA seq
381 aa
AA seq
DB search
MKPLDYSGPVAPSRRARSGGTKRPRPAIVKEMARAAGLVLVDQSALRLTRRKAGRGYCYF
DASGTLITDEPTRARLASLAVPPAHKQVRYAENPRAHLQAVGYDAAGRLQYRYHPRWELV
RERCKAERLARFAEALSTIRRAVARDLGSPPGSRTFALSAVVELVTLTAIRAGEEGYARA
RGTRGAATLLKSNLRSEEGQLILSFRAKGGRRTVCQITDPRFIVIVSSLSALPGRRLFQY
RDDAGAVRTVRAGDVNAYLKEVAGVPVSLKDFRTLVASASVLDILARAEPASSARARNAQ
VVAAIRAAAETLNNTPAICRKSYVMPAVVAAFEDGTLSRFAATLKRCRSPIRRAGILAEL
IRESCGAGANVTLKDAPRASP
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccgctcgactatagcggccccgtcgccccgtcccgccgcgcccgatcgggcgga
acgaagcggccgcgcccggccatcgtgaaggagatggcgcgggcggcgggtctcgtactg
gtggaccagtcagccctgcggctcacccggcgcaaggcggggcgcggctactgctatttc
gatgcgtccggcacgctcatcaccgacgagccgacgcgcgcccgcctcgcgtcgctcgcc
gttcctccggcgcataagcaggtgcgttacgcggaaaatccccgggctcatcttcaggcg
gtcggctatgacgcagccggccgcctccagtatcgctaccatccgcgctgggaactggtg
cgcgagcggtgcaaggcggagcgcctcgcacgcttcgccgaagccctgtccaccatccgg
cgggcggtggcgcgggatctcggctcaccccccggttcgcggaccttcgcgctctcggcc
gtggtggaactcgtgaccctcaccgccatccgcgccggggaggaaggctatgcccgagcc
cgcggcacccgcggggcggcgaccctgctgaagtccaatctccgcagcgaggaggggcag
ctcatcctgagtttccgagcgaaggggggccggcgaaccgtctgccagatcaccgatccc
cgtttcatcgtgatcgtctcgtctctctccgccctgcccggtcggcggctgttccagtac
cgagacgacgccggagccgttcggaccgtgcgggcgggcgatgtgaacgcttatctcaag
gaggtcgcgggcgttccggtctcgctcaaggatttccgaacgctggtggcttcagcgagc
gtcctcgacatcctcgcccgtgcggagcccgcgtccagcgcccgcgcgcgcaatgcgcag
gtggtcgcggccatccgagcggccgcggagacgctgaacaacacgcccgccatatgccgc
aagagctatgtgatgccggccgtggtcgccgccttcgaggacggcaccctgtcccgcttc
gccgcaaccctgaagcgctgccgctcgcccatccgccgggccggcatcctggccgaactg
atccgcgagagctgcggtgccggggcgaacgtgacgctcaaggacgcgcctcgagcctcg
ccataa
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