Azorhizobium caulinodans: AZC_2366
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Entry
AZC_2366 CDS
T00609
Name
(GenBank) helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
azc
Azorhizobium caulinodans
Pathway
azc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZC_2366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azc03019
]
AZC_2366
Enzymes [BR:
azc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AZC_2366
Messenger RNA biogenesis [BR:
azc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AZC_2366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
BAF88364
UniProt:
A8I658
LinkDB
All DBs
Position
complement(2693147..2694769)
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AA seq
540 aa
AA seq
DB search
MTSFSELGLAEPIVRALTEEKHVTPTPIQAQAIPAILSGKDLIGIAQTGTGKTAAFGLPI
LDHLSRNPRRIEPRSCRVLILSPTRELSGQILDNLDKFGRHIRLSTTLAIGGVPMGRQIR
ALQRGVDVLVATPGRLMDLVENNALKLDTVEVFVLDEADQMLDMGFVHAIKAIVRRLPHK
RHSLFFSATMPSAIADLAASMLRNPVTVAVTPVAKTADRVDQRVIFVEKPAKAKMLAEVL
STEEVDRALVFTRTKHGADKVVQVLARAGHKAEAIHGNKSQNQRDRVLAAFREGSLRTLV
ATDIAARGIDVTGVSHVINYDLPNVPESYVHRIGRTARAGREGIAISFCDGEERAYLRSI
EKLIRMTLPTTDRRGEARPAEAADAVGEDRPRANAQPRGERQERREPRGERKEARPPRAE
RPQGERVQGDRPRGERPRGERTGAERNGAERNGAERHGAERVHSERPAGARQRSAAGPHG
EGRKADARPAHGGRAEQPRSERGGRAQGGQRAQSSEIGAIGFMRAPARSDKTGPARRPVR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
ttgacctcattttctgaactcggccttgccgagcccatcgtccgtgcgctgaccgaagaa
aagcacgtgacgcccacgcccattcaggcacaggccattccggccatcctctctggcaag
gatctcatcggcatcgcccagacgggcaccggcaagaccgccgccttcggccttcccatc
cttgaccacctctcgcgcaacccgcgccgcatcgagccccgctcctgccgggtgctgatc
ctctcgcccacccgcgagctctccggccaaatcctcgacaatcttgacaagttcggccgc
cacatccgcctctccaccacgctcgccatcggcggtgtgcccatgggccggcagatccgg
gcgctccagcggggcgtcgacgtgctcgtcgccacccccggccgcctcatggacctggtc
gagaacaatgccctgaagctcgacaccgtcgaggtgttcgtgctcgacgaggcggaccag
atgctggacatgggcttcgtccatgccatcaaggccatcgtccgtcgcctgccgcacaag
cggcacagcctcttcttctccgccaccatgccctcggccatcgccgatcttgcggcctcc
atgctccgcaatccggtcacggttgctgtgacgccggtcgccaagacggccgaccgcgtg
gaccagcgggtcatcttcgtggagaagcccgccaaggcgaagatgctcgccgaggtgctc
agcaccgaggaggtcgaccgcgccctcgtcttcacccgcaccaagcatggcgcggacaag
gtggtgcaggtgctcgcccgcgccggccacaaggccgaggccatccacggcaacaagtcc
cagaaccagcgcgaccgtgtgctcgcggccttccgcgaaggttcgctgcgcaccctggtg
gccaccgacatcgccgcacgcggcattgatgtcaccggcgtgagccatgtgataaattac
gacctgccgaacgttcccgaatcctacgttcaccgcatcggccgcacggcccgcgcgggg
cgcgaaggcatcgccatctcgttctgtgacggcgaggagcgcgcctacctgcggtccatc
gagaagctcatccgcatgacgcttccgaccaccgaccgccggggcgaagcacgcccggcg
gaggctgcggacgcggtgggcgaggatcgtccgcgggcgaatgcccagccccggggcgaa
cgtcaggagcggcgcgagccgcgtggcgaacgcaaggaagcgcgtccgccgcgggccgag
cgcccgcagggtgagcgcgtccagggcgatcgcccgcgcggtgaacgtccgcgtggcgag
cgcaccggcgcggagcgcaacggtgccgagcgcaatggtgctgagcgtcatggcgccgag
cgcgtgcattccgagcgtccggcgggagcgcgtcagcgttcggcggccgggcctcatggt
gagggccgcaaggccgacgcccgtccggcccatggtggccgcgccgagcagccgcgcagc
gagcgtggcggccgggcgcagggcggtcagcgcgctcagagctccgagatcggagccatt
ggtttcatgcgggcgcctgcccgcagcgacaagaccggtccggcacgtcgtccggtccgc
tga
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integrated database retrieval system
